LOCUS BC018711 2162 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA binding motif protein 38, mRNA (cDNA clone
MGC:31775 IMAGE:4852523), complete cds.
ACCESSION BC018711
VERSION BC018711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: i Column: 18.
FEATURES Location/Qualifiers
source 1..2162
/db_xref="H-InvDB:HIT000038413"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31775 IMAGE:4852523"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2162
/gene="RBM38"
/gene_synonym="dJ800J21.2"
/gene_synonym="HSRNASEB"
/gene_synonym="SEB4B"
/gene_synonym="SEB4D"
/db_xref="GeneID:55544"
/db_xref="HGNC:HGNC:15818"
CDS 6..656
/gene="RBM38"
/gene_synonym="dJ800J21.2"
/gene_synonym="HSRNASEB"
/gene_synonym="SEB4B"
/gene_synonym="SEB4D"
/codon_start=1
/product="RBM38 protein"
/protein_id="AAH18711.1"
/db_xref="GeneID:55544"
/db_xref="HGNC:HGNC:15818"
/translation="MHGSQKDTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVIT
DRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSLQTGFAIG
VQQLHPTLIQRTYGLTPHYIYPPAIVQPSVVIPAAPVPSLSSPYIEYTPASPAYAQYP
PATYDQYPYAASPATAASFVGYSYPAAVPQALSAAAPAGTTFVQYQAPQLQPDRMQ"
BASE COUNT 430 a 670 c 629 g 433 t
ORIGIN
1 gcgccatgca cggctcgcag aaggacacca cgttcaccaa gatcttcgtg ggcggcctgc
61 cgtaccacac taccgacgcc tcgctcagga agtacttcga gggcttcggc gacatcgagg
121 aggccgtggt catcaccgac cgccagacgg gcaagtcccg cggctacggc ttcgtgacca
181 tggccgaccg ggcggcagct gagagggctt gcaaagaccc gaaccccatc atcgacggcc
241 gcaaggccaa cgtgaacctg gcatatctgg gcgccaagcc gcggagcctc cagacgggct
301 ttgccattgg ggtgcagcag ctgcacccca ccttgatcca gcggacttac gggctgaccc
361 cgcactacat ctacccacca gccatcgtgc agcccagcgt ggtgatccca gccgcccctg
421 tcccgtcgct gtcctcgccc tacattgagt acacgccggc cagcccggcc tacgcccagt
481 acccaccggc cacctatgac cagtacccat acgccgcctc gcctgccacg gctgccagct
541 tcgtgggcta cagctaccct gccgccgtgc cccaggccct ctcagccgca gcacccgcgg
601 gcaccacttt cgtgcagtac caggcgccgc agctgcagcc tgacaggatg cagtgagggg
661 cgttcctgcc ccgaggactg tggcattgtc accttcacag cagacagagc tgccaggcca
721 tgatgggctg gcgacagccc ggctgagctt cagtgaggtg ccaccagcac ccgtgcctcc
781 gaagaccgct cgggcattcc gcctgcgccc tgggacagcg gagagacggc ttctctttaa
841 tctaggtccc attgtgtctt gagggaggac tttaagaatg actgagaact atttaaagac
901 gcaatcccag gttccttgca caccatggca gcctctcctt gcaccttctc ctgcctctcc
961 acactccagg ttccctcagg cttgtgtccc cactgctgca tcgtggcggg gtgtcacaga
1021 ccctctgcag cccctggctg ccctggactg tgcagagatg cctgactcca gggaaacctg
1081 aaagcaagaa gttaatggac tgtttattgt aacttgatcc tcccgagctg tgagcgcagt
1141 ctgaggtgtg aggacacggc ctcctgttgg agtcccattt tctccatcag ggcacgtggg
1201 cggcttcctc aagcccggag gagctcccag gcgcacaggg gccgccggta acaggggccg
1261 ccggccaaag gcccctttcc agtcatagca ctgaagttgc aacttttttc ttgtaattgt
1321 tttgctacta agataatttc agaagttcag tctatttttt cagcggatac tgccgccacc
1381 aagaatccaa aacctatttt tgacttggag agacttgctt ttgttggttc cgcccgtgga
1441 gacgacgata gtgtttctgt ataataaagt gtctgccggc tcgcgggcca ggatcctctc
1501 ggtgggatgg gcaccacaga caggaggccc ctcaggcccg tgcgggccac tgtctgctgc
1561 cgcctgccgg ggtggcagag tgagttgtct caggaccccg tcactgcgac gttgacactc
1621 ctctcccttc ccttcctccc caactcccca aacactgtgg aaggggagaa ggaagtgatc
1681 cacagcattc aggccacttg gggtctagac catggtggtg ccagcctggg gggggcagtg
1741 gccctcagct ctgcccgctg gagcggttga gtgcagaagg gtgcgcctct tccctctacc
1801 cccgcaccac ctgctgtgtg ccagcctgag acggttcctg cctgtcttgg gggttggtgg
1861 agggtggagg cagttctgcc agccgtggca gggctgctat ggggcatcca gggctgtggg
1921 ggtctggagg aggggacatg aggtgagagg tatcctggcc gagggcgggg ggcagcgggg
1981 ggtctccctc cggacctacc tcagggagct gagcgtgcag gcgctccagg gcaggcctgg
2041 gacagagtca aggctcagag aataaaggta gctaatctca tcataatatt tttattagaa
2101 tgttctgatg ataaaaataa aacttgtttt ctttaaagaa aaaaaaaaaa aaaaaaaaaa
2161 aa
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