LOCUS BC018709 2451 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens retina and anterior neural fold homeobox 2, mRNA (cDNA
clone MGC:31769 IMAGE:4635722), complete cds.
ACCESSION BC018709
VERSION BC018709.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: g Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127653.
FEATURES Location/Qualifiers
source 1..2451
/db_xref="H-InvDB:HIT000038411"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31769 IMAGE:4635722"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2451
/gene="RAX2"
/gene_synonym="ARMD6"
/gene_synonym="CORD11"
/gene_synonym="QRX"
/db_xref="GeneID:84839"
/db_xref="HGNC:HGNC:18286"
/db_xref="MIM:610362"
CDS 328..882
/gene="RAX2"
/gene_synonym="ARMD6"
/gene_synonym="CORD11"
/gene_synonym="QRX"
/codon_start=1
/product="retina and anterior neural fold homeobox 2"
/protein_id="AAH18709.1"
/db_xref="GeneID:84839"
/db_xref="HGNC:HGNC:18286"
/db_xref="MIM:610362"
/translation="MFLSPGEGPATEGGGLGPGEEAPKKKHRRNRTTFTTYQLHQLER
AFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQERLESGSGAVAAPRLPE
APALPFARPPAMSLPLEPWLGPGPPAVPGLPRLLGPGPGLQASFGPHAFAPTFADGFA
LEEASLRLLAKEHAQALDRAWPPA"
BASE COUNT 493 a 817 c 763 g 378 t
ORIGIN
1 gcgccaggcc cgctggggca ggtgtcccgt ggaaatcgac ggaggggctg ccgtgggcgg
61 ccgtgacagt cacagagagg ggaagagaaa acagggacgg tgacacacac agagagaagg
121 aagagcagac agaggcacag caggagaccc ccccaagccc gaggaggaca gcctggggat
181 gcagagcaca tgccggcccc agtggaggga accgatttcc ccggagccgg gaggcaagcc
241 tggggctccc ctgccctgtc cctgccggta gcccccccag ccgtctcccc accatctgtc
301 ccgctgccgt cccaccaggt gggagccatg ttcctgagcc cgggcgaggg gccggcaacc
361 gagggtgggg gtctggggcc gggcgaggag gcccccaaga agaagcaccg gaggaaccgc
421 accaccttca ccacctacca gctgcaccag ctggagcggg cgttcgaggc ctctcactac
481 ccggatgtgt acagccgtga ggagctggca gccaaggtgc acctacctga ggtgcgcgtg
541 caggtgtggt tccagaaccg ccgggccaag tggcgccgcc aggagcggct ggagtcaggc
601 tcgggtgccg tggcagctcc gagactcccc gaggccccag cgctgccgtt cgcccgcccc
661 ccggccatgt cgctgcccct ggagccctgg ttgggccccg gaccgccggc cgtgccaggc
721 ctcccccgcc tcctgggccc gggcccgggg ctgcaagcgt ccttcgggcc tcatgccttt
781 gctcccacct tcgcagatgg cttcgccctg gaggaggcgt ccctgcggct gctggccaag
841 gaacatgcac aggctctgga cagggcctgg ccgccagcct gagcctgccg ccctcccggg
901 ccccctcctc ggcccaaccc gagaaccggg gacgtgccct ggtgacagcc accacgcctt
961 ggcctaggcc gaggtcatgg agcaaccgtg gtcaggccag gccaccacca ctggggagcg
1021 ggaccagaga gacaggctgc tgggttccct gcccccatcc cgtctcccac cccatcgcca
1081 cccgtcctgc tggcagcgga ctggccccca gtgtcaggca ggaggtgacc caagtattct
1141 caggccaggt gcggggacct cctcccctcc tggggcctca gtctcctgtc tgttaattgg
1201 gcgtgggggc ctccgaggtt cgagggctgc gaggctgtgg gtggcgggac cgctgactct
1261 gtaagatgag tgtaaatctc tctgcttctc ctaatcccca tcagcagagc tgcccactct
1321 ccaggctccc agtcccctgg aaataacaaa tagcagcagc tcccgcgagc ctggtctcct
1381 ctcaccgtgt gctcgccatg tgagcactcc cctctccgtt gtgccctgga cctcgggcac
1441 agctgtcagc ccattctata gagagggaaa ccggggctta ggcaggaagc caggtcccca
1501 aagtcgcacg gccaggagtg gatggagctg cctttcagac ccatcaccgg tcctaccgtc
1561 cggggcacag cgacaggttc tggagagagg gtgggtcccg ggccaggtgc tggtgggcct
1621 ccaggtggag gcgggctgat gctgggtgtg tcgtcatcgt cagaccgttc ctcacgtccc
1681 cacagacccc aggccctgtg catgtcccca gtggaggcat ggccagcatc tgctctgtcc
1741 aacccagtcg catcgcccaa gagctctgag caaggaggct gtcgcggggc cgagaacccg
1801 ctgggactgg caagcacggc tggcccagtg cagcaggagg gggccctgag gcatgggatg
1861 ggacagtctg ggccagcgcc acctcccggg acagaagtgc ggcaccaggg caggagctgc
1921 agtagctacc ctccccgtct ccagcctggg ctccccagat cactcccaga tcaccaggtc
1981 accccatctc taggcggcac ctcacacacc agtcctgtgg tccaacgccc cgccatcacc
2041 caatgtcacc gcacaccagg cagtggggac acggcagtaa gcacaagaaa gatttttttt
2101 tttttaaagc taaaccaggc caggtgcggt ggctcatgcc tgtaatccca gtgctttggg
2161 aggctgaggt gggaggattg cttgagacca gcctgggtga cacagcaaga ccccatctcc
2221 acaaacgttt ttaaaatgtg ccgggtgtac tggtgcacac ctgtcatccc agctacccaa
2281 gaagctgagg caagaggatc acttgagccc agaaggtcga ggctgcaggg agctgtgatc
2341 acactgctgc actccagcct gtgcaacaga gccagaccct gactcaatac aaataaaaac
2401 caaatctaaa ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//