LOCUS BC018698 2221 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PRP19/PSO4 pre-mRNA processing factor 19 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:4240 IMAGE:2961655), complete
cds.
ACCESSION BC018698
VERSION BC018698.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2221)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2221)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC018698.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222313.
FEATURES Location/Qualifiers
source 1..2221
/db_xref="H-InvDB:HIT000038402"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4240 IMAGE:2961655"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2221
/gene="PRPF19"
/gene_synonym="hPSO4"
/gene_synonym="NMP200"
/gene_synonym="PSO4"
/gene_synonym="UBOX4"
/db_xref="GeneID:27339"
/db_xref="HGNC:HGNC:17896"
/db_xref="MIM:608330"
CDS 203..1717
/gene="PRPF19"
/gene_synonym="hPSO4"
/gene_synonym="NMP200"
/gene_synonym="PSO4"
/gene_synonym="UBOX4"
/codon_start=1
/product="PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)"
/protein_id="AAH18698.1"
/db_xref="GeneID:27339"
/db_xref="HGNC:HGNC:17896"
/db_xref="MIM:608330"
/translation="MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINN
QPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQE
LSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPM
DLGELVGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHS
ASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ
DLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSD
IQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHS
GPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYL
ALGGTDVQIYICKQWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFYSL"
BASE COUNT 541 a 604 c 612 g 464 t
ORIGIN
1 atttccgtta ggtgctgaag gctgtggcgc gcggctgtcc ccattcccac gtgaagcgct
61 acgctagcat cgctcggctg gcggctccca gctcgccgcg gagcagtccc ggcagcagcg
121 ggggaccgga agtggctcgc ggaggctcag aagctagtcc cggagcccgg cgtgtggcgc
181 ctcggagcac ggtgacggcg ccatgtccct aatctgctcc atctctaacg aagtgccgga
241 gcacccatgt gtatcccctg tctctaatca tgtttatgag cggcggctca tcgagaagta
301 cattgcggag aatggtaccg accccatcaa caaccagcct ctctccgagg agcagctcat
361 cgacatcaaa gttgctcacc caatccggcc caagcctccc tcagccacca gcatcccggc
421 cattctgaaa gctttgcagg atgagtggga tgcagtcatg ctgcacagct tcactctgcg
481 ccagcagctg cagacaaccc gccaagagct gtcacacgct ctgtaccagc acgatgccgc
541 ctgccgtgtc attgcccgtc tcaccaagga agtcactgct gcccgagaag ctctggctac
601 cctgaaacca caggctggcc tcattgtgcc ccaggctgtg ccaagttccc aaccaagtgt
661 tgtgggtgcg ggtgagccaa tggatttggg tgagctggtg ggaatgaccc cagagattat
721 tcagaagctt caagacaaag ccactgtgct aaccacggag cgcaagaaga gagggaagac
781 tgtgcctgag gagctggtga agccagaaga gctcagcaaa taccggcagg tggcatccca
841 cgtggggttg cacagtgcca gcattcctgg gatcctggcc ctggacctct gcccgtccga
901 caccaacaag atcctcactg gtggggcgga taaaaatgtc gttgtgtttg acaaaagttc
961 tgaacaaatc ctggctaccc tcaaaggcca taccaagaag gtcaccagcg tggtgtttca
1021 cccttcccag gacctggtgt tttctgcttc ccccgatgcc actatcagga tttggtcggt
1081 ccccaatgcc tcttgtgtac aggtggttcg ggcccatgag agtgctgtga caggcctcag
1141 ccttcatgcc actggcgact atctcctgag ctcctccgat gatcagtact gggctttctc
1201 tgacatccag acagggcgtg tgctcaccaa ggtgacagat gagacctccg gctgctctct
1261 cacctgtgca cagttccacc ctgacggact catctttgga acaggaacca tggactctca
1321 gatcaagatc tgggacttga aggaacgtac taatgtggcc aacttccctg gccactcggg
1381 ccccatcact agcatcgcct tctctgagaa tggttactac ctggctacag cggctgatga
1441 ctcctctgtc aagctctggg atctgcgcaa gcttaagaac tttaagactt tgcagctgga
1501 taacaacttt gaggtaaagt cactgatctt tgaccagagt ggtacctacc tggctcttgg
1561 gggcacggat gtccagatct acatctgcaa acaatggacg gagattcttc actttacaga
1621 gcatagcggc ctgaccacag gggtggcctt cgggcatcac gccaagttca tcgcttcaac
1681 aggcatggac agaagcctca agttctacag cctgtaggcc ctggcccttc tgatggaagc
1741 tgggcctcat ctcagtagag gggtagaatt agggtttggg gggggggtgg ggggaatcta
1801 tggggggagg gggctctgtg gggtgggaca ttcacatcat ttcactctgg tctgagtggt
1861 ggcctgagaa ccatggtggc atggaccacc ctcatccatg caactccagg ccccatggga
1921 acggatgtgg aaggaagaac tgtcaccctc ttaaggccca gggtcggagc ccagggcctc
1981 tcccttcctg tcgttcaatg gacgtggtgg tggctgttcc acacccattt tgttgcagtt
2041 cctgtgagac aggagaggct gagccaaggg aactgtgaag gggatgggca ggagggcttg
2101 tgcagggttt tgtaagcagt gatctagttt cattaaaaaa agaaaacaat aaaaaaaaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 a
//