LOCUS BC018694 2823 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 4,
mRNA (cDNA clone IMAGE:3506191), partial cds.
ACCESSION BC018694
VERSION BC018694.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2823)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2823)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC018694.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: p Column: 23.
FEATURES Location/Qualifiers
source 1..2823
/db_xref="H-InvDB:HIT000038399"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3506191"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2823
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
CDS <1..2400
/gene="UBR4"
/gene_synonym="p600"
/gene_synonym="RBAF600"
/gene_synonym="RP5-1126H10.1"
/codon_start=1
/product="UBR4 protein"
/protein_id="AAH18694.2"
/db_xref="GeneID:23352"
/db_xref="HGNC:HGNC:30313"
/db_xref="MIM:609890"
/translation="DIKNKICQDCDLVALLEDDSGMELLVNNKIISLDLPVAEVYKKV
WCTTNEGEPMRIVYRMRGLLGDATEEFIESLDSTTDEEEDEEEVYKMAGVMAQCGGLE
CMLNRLAGIRDFKQGRHLLTVLLKLFSYCVKVKVNRQQLVKLEMNTLNVMLGTLNLAL
VAEQESKDSGGAAVAEQVLSIMEIILDESNAEPLSEDKGNLLLTVDKDQLVMLLDQIN
STFVRSNPSVLQGLLRIIPYLSFGEVEKMQILVERFKPYCNFDKYDEDHSGDDKVFLD
CFCKIAAGIKNNSNGHQLKDLILQKGITQNALDYMKKHIPSAKNLDADIWKKFLSRPA
LPFILRLLRGLAIQHPGTQVLIGTDSIPNLHKLEQVSSDEGIGTLAENLLEALREHPD
VNKKIDAARRETRAEKKRMAMAMRQKALGTLGMTTNEKGQVVTKTALLKQMEELIEEP
GLTCCICREGYKFQPTKVLGIYTFTKRVALEELENKPRKQQGYSTVSHFNIVHYDCHL
AAVRLARGREEWESAALQNANTKCNGLLPVWGPHVPESAFATCLARHNTYLQECTGQR
EPTYQLNIHDIKLLFLRFAMEQSFSADTGGGGRESNIHLIPYIIHTVLYVLNTTRATS
REEKNLQGFLEQPKEKWVESAFEVDGPYYFTVLALHILPPEQWRATRVEILRRLLVTS
QARAVAPGGATRLTDKAVKDYSAYRSSLLFWALVDLIYNMFKKVPTSNTEGGWSCSLA
EYIRHNDMPIYEAADKALKTFQEEFMPVETFSEFLDVAGLLSEITDPESFLKDLLNSV
P"
BASE COUNT 781 a 712 c 735 g 595 t
ORIGIN
1 gatataaaga acaagatttg ccaggactgt gacttagtgg ccctcctgga agatgacagt
61 ggcatggagc ttctagtgaa caataaaatc attagtttgg accttcctgt ggctgaagtt
121 tacaagaaag tctggtgtac cacgaatgag ggagagccca tgaggattgt ttatcgtatg
181 cgggggctgc tgggcgatgc cacagaggag ttcattgagt ccctggactc tactacagat
241 gaagaagaag atgaagaaga agtgtataaa atggctggtg tgatggccca gtgtgggggc
301 ctggaatgca tgcttaacag actcgcaggg atcagagatt tcaagcaggg acgccacctt
361 ctaacagtgc tactgaaatt gttcagttac tgcgtgaagg tgaaagtcaa ccggcagcaa
421 ctggtcaaac tggaaatgaa caccttgaac gtcatgctgg ggaccctaaa cctggccctt
481 gtagctgaac aagaaagcaa ggacagtggg ggtgcagctg tggctgagca ggtgcttagc
541 atcatggaga tcattctaga tgagtccaat gctgagcccc tgagtgagga caagggcaac
601 ctcctcctga cagttgacaa ggatcaactg gtgatgctct tggaccagat caacagcacc
661 tttgttcgct ccaaccccag tgtgctccag ggcctgcttc gcatcatccc gtacctttcc
721 tttggagagg tggagaaaat gcagatcttg gtggagcgat tcaaaccata ctgcaacttt
781 gataaatatg atgaagatca cagtggtgat gataaagtct tcctggactg cttctgtaaa
841 atagctgctg gcatcaagaa caacagcaat gggcaccagc tgaaggatct gattctccag
901 aaggggatca cccagaatgc acttgactac atgaaaaagc acatccctag cgccaagaat
961 ttggatgccg acatctggaa aaagtttttg tctcgcccag ccttgccatt tatcctaagg
1021 ctgcttcggg gcctggccat ccagcaccct ggcacccagg ttctgattgg aactgattcc
1081 atcccgaacc tgcataagct ggagcaggtg tccagtgatg agggcattgg gaccttggca
1141 gagaacctgc tggaagccct gcgggaacac cctgacgtaa acaagaagat tgacgcagcc
1201 cgcagggaga cccgggcaga gaagaaacgc atggccatgg caatgaggca gaaggccctg
1261 ggcaccctgg gcatgacgac aaatgaaaag ggccaggtcg tgaccaagac agcactcctg
1321 aagcagatgg aagagctgat cgaggagcct ggcctcacgt gctgcatctg cagggaggga
1381 tacaagttcc agcccacaaa ggtcctgggc atttatacct tcacgaagcg ggtagccttg
1441 gaggagttgg agaataagcc ccggaaacag cagggctaca gcaccgtgtc ccacttcaac
1501 attgtgcact acgactgcca tctggctgcc gtcaggttgg ctcgaggccg ggaagagtgg
1561 gagagtgccg ccctgcagaa tgccaacacc aagtgcaacg ggctccttcc ggtctgggga
1621 cctcatgtcc ctgaatcagc ttttgccact tgcttggcaa gacacaacac ttacctccag
1681 gaatgtacag gccagcggga gcccacgtat cagctcaaca tccacgacat caaactgctc
1741 ttcctgcgct tcgccatgga gcagtcgttc agcgcagaca ctggcggggg cggccgggag
1801 agcaacatcc acctgatccc gtacatcatt cacactgtgc tttacgtcct gaacacaacc
1861 cgagcaactt cccgagaaga gaagaacctc caaggctttc tggaacagcc caaggagaag
1921 tgggtggaga gtgcctttga agtggacggg ccctactatt tcacagtctt ggcccttcac
1981 atcctgcccc ctgagcagtg gagagccaca cgtgtggaaa tcttgcggag gctgttggtg
2041 acctcgcagg ctcgggcagt ggctccaggt ggagccacca ggctgacaga taaggcagtg
2101 aaggactatt ccgcttaccg ttcttccctt ctcttttggg ccctcgtcga tctcatttac
2161 aacatgttta agaaggtgcc taccagtaac acagagggag gctggtcctg ctctctcgct
2221 gagtacatcc gccacaacga catgcccatc tacgaagctg ccgacaaagc cctgaaaacc
2281 ttccaggagg agttcatgcc agtggagacc ttctcagagt tcctcgatgt ggccggtctt
2341 ttatcagaaa tcaccgatcc agagagcttc ctgaaggacc tgttgaactc agtcccctga
2401 ccaccacaca gcagctgcgg cggcgaagac gaagctggct tgccttccac cctctgttct
2461 ccctccttgt gcattaagtt ccctccgcgg gatgctgcat tgttaccccg ccctcccctc
2521 tctcattttt cttggtgtgg cttggggttt ttaggcttcc tgttttatct cgtgtgtgtg
2581 gtgcaccagc tatgaggttg tctgtaaccc aagccatcaa agggcctgta catacctagg
2641 agccatgagt tgtcccggcc agcttcatac ttgagtgtgc acatcttgag aaataaacaa
2701 gtgacttaac acacattgaa aaggaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2821 aaa
//