LOCUS BC018650 2811 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens sphingosine-1-phosphate receptor 1, mRNA (cDNA clone
MGC:22155 IMAGE:4071217), complete cds.
ACCESSION BC018650
VERSION BC018650.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2811)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2811)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 32 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13027635.
FEATURES Location/Qualifiers
source 1..2811
/db_xref="H-InvDB:HIT000038386"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22155 IMAGE:4071217"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2811
/gene="S1PR1"
/gene_synonym="CHEDG1"
/gene_synonym="D1S3362"
/gene_synonym="ECGF1"
/gene_synonym="EDG-1"
/gene_synonym="S1P1"
/db_xref="GeneID:1901"
/db_xref="HGNC:HGNC:3165"
/db_xref="MIM:601974"
CDS 249..1397
/gene="S1PR1"
/gene_synonym="CHEDG1"
/gene_synonym="D1S3362"
/gene_synonym="ECGF1"
/gene_synonym="EDG-1"
/gene_synonym="S1P1"
/codon_start=1
/product="sphingosine-1-phosphate receptor 1"
/protein_id="AAH18650.1"
/db_xref="GeneID:1901"
/db_xref="HGNC:HGNC:3165"
/db_xref="MIM:601974"
/translation="MGPTSVPLVKAHRSSVSDYVNYDIIVRHYNYTGKLNISADKENS
IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANL
LLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLKMKLHNGSNNFRL
FLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLYHKHYILFCTTVFTLLLLSIV
ILYCRIYSLVRTRSRRLTFRKNISKASRSSEKSLALLKTVIIVLSVFIACWAPLFILL
LLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMSCCKCPSG
DSAGKFKRPIIAGMEFSRSKSDNSSHPQKDEGDNPETIMSSGNVNSSS"
BASE COUNT 707 a 707 c 629 g 768 t
ORIGIN
1 ggggagtcgg gggcagcagc aagatgcgaa gcgagccgta cagatcccgg gctctccgaa
61 cgcaacttcg ccctgcttga gcgaggctgc ggtttccgag gccctctcca gccaaggaaa
121 agctacacaa aaagcctgga tcactcatcg aaccacccct gaagccagtg aaggctctct
181 cgcctcgccc tctagcgttc gtctggagta gcgccacccc ggcttcctgg ggacacaggt
241 ttggcaccat ggggcccacc agcgtcccgc tggtcaaggc ccaccgcagc tcggtctctg
301 actacgtcaa ctatgatatc atcgtccggc attacaacta cacgggaaag ctgaatatca
361 gcgcggacaa ggagaacagc attaaactga cctcggtggt gttcattctc atctgctgct
421 ttatcatcct ggagaacatc tttgtcttgc tgaccatttg gaaaaccaag aaattccacc
481 gacccatgta ctattttatt ggcaatctgg ccctctcaga cctgttggca ggagtagcct
541 acacagctaa cctgctcttg tctggggcca ccacctacaa gctcactccc gcccagtggt
601 ttctgcggga agggagtatg tttgtggccc tgtcagcctc cgtgttcagt ctcctcgcca
661 tcgccattga gcgctatatc acaatgctga aaatgaaact ccacaacggg agcaataact
721 tccgcctctt cctgctaatc agcgcctgct gggtcatctc cctcatcctg ggtggcctgc
781 ctatcatggg ctggaactgc atcagtgcgc tgtccagctg ctccaccgtg ctgccgctct
841 accacaagca ctatatcctc ttctgcacca cggtcttcac tctgcttctg ctctccatcg
901 tcattctgta ctgcagaatc tactccttgg tcaggactcg gagccgccgc ctgacgttcc
961 gcaagaacat ttccaaggcc agccgcagct ctgagaagtc gctggcgctg ctcaagaccg
1021 taattatcgt cctgagcgtc ttcatcgcct gctgggcacc gctcttcatc ctgctcctgc
1081 tggatgtggg ctgcaaggtg aagacctgtg acatcctctt cagagcggag tacttcctgg
1141 tgttagctgt gctcaactcc ggcaccaacc ccatcattta cactctgacc aacaaggaga
1201 tgcgtcgggc cttcatccgg atcatgtcct gctgcaagtg cccgagcgga gactctgctg
1261 gcaaattcaa gcgacccatc atcgccggca tggaattcag ccgcagcaaa tcggacaatt
1321 cctcccaccc ccagaaagac gaaggggaca acccagagac cattatgtct tctggaaacg
1381 tcaactcttc ttcctagaac tggaagctgt ccacccaccg gaagcgctct ttacttggtc
1441 gctggccacc ccagtgtttg gaaaaaaatc tctgggcttc gactgctgcc agggaggagc
1501 tgctgcaagc cagagggagg aagggggaga atacgaacag cctggtggtg tcgggtgttg
1561 gtgggtagag ttagttcctg tgaacaatgc actgggaagg gtggagatca ggtcccggcc
1621 tggaatatat tttctacccc cctggagctt tgattttgca ctgagccaaa ggtctagcat
1681 tgtcaagctc ctaaagggtt catttggccc ctcctcaaag actaatgtcc ccatgtgaaa
1741 gcgtctcttt gtctggagct ttgaggagat gttttccttc actttagttt caaacccaag
1801 tgagtgtgtg cacttctgct tctttaggga tgccctgtac atcccacacc ccaccctccc
1861 ttcccttcat acccctcctc aacgttcttt tactttatac tttaactacc tgagagttat
1921 cagagctggg gttgtggaat gatcgatcat ctatagcaaa taggctatgt tgagtacgta
1981 ggctgtggga agatgaagat ggtttggagg tgtaaaacaa tgtccttcgc tgaggccaaa
2041 gtttccatgt aagcgggatc cgttttttgg aatttggttg aagtcacttt gatttcttta
2101 aaaaacatct tttcaatgaa atgtgttacc atttcatatc cattgaagcc gaaatctgca
2161 taaggaagcc cactttatct aaatgatatt agccaggatc cttggtgtcc taggagaaac
2221 agacaagcaa aacaaagtga aaaccgaatg gattaacttt tgcaaaccaa gggagatttc
2281 ttagcaaatg agtctaacaa atatgacatc tgtctttggc acttttgttg atgtttattt
2341 cagaatgttg tgtgattcat ttcaagcaac aacatggttg tattttgttg tgttaaaagt
2401 acttttcttg atttttgaat gtatttgttt cagcagaagt cattttattg gatttttcta
2461 acccgtgtta acaccattga atgtgtattt cttaagaaaa taccaccctc ttgtgccctt
2521 aaaagcatta ctttaactgg tagggaacgc cagaaacttt tcagtccagc tattcattag
2581 atagtaattg aagatatgta taaatattac aaagaataaa aatatattac tgtctcttta
2641 gtatggtttt cagtgcaatt aaaccgagag atgtcttgtt tttttaaaaa gaatagtatt
2701 taataggttt ctgacttttg tggatcattt tgcacatagc tttatcaact tttaaacatt
2761 aataaactga tttttttaag gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//