LOCUS BC018634 2142 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens microtubule-associated protein 1 light chain 3 beta,
mRNA (cDNA clone MGC:14924 IMAGE:3623259), complete cds.
ACCESSION BC018634
VERSION BC018634.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC018634.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: a Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676203.
FEATURES Location/Qualifiers
source 1..2142
/db_xref="H-InvDB:HIT000038376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14924 IMAGE:3623259"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2142
/gene="MAP1LC3B"
/gene_synonym="MAP1A/1BLC3"
/db_xref="GeneID:81631"
/db_xref="HGNC:HGNC:13352"
CDS 72..449
/gene="MAP1LC3B"
/gene_synonym="MAP1A/1BLC3"
/codon_start=1
/product="microtubule-associated protein 1 light chain 3
beta"
/protein_id="AAH18634.1"
/db_xref="GeneID:81631"
/db_xref="HGNC:HGNC:13352"
/translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL
PVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESE
KDEDGFLYMVYASQETFGMKLSV"
BASE COUNT 647 a 461 c 436 g 598 t
ORIGIN
1 gcagccgccg cccccgggag ccgccgggac cctcgcgtcg tcgccgccgc cgccgcccag
61 atccccgcac catgccgtcg gagaagacct tcaagcagcg ccgcaccttc gaacaaagag
121 tagaagatgt ccgacttatt cgagagcagc atccaaccaa aatcccggtg ataatagaac
181 gatacaaggg tgagaagcag cttcctgttc tggataaaac aaagttcctt gtacctgacc
241 atgtcaacat gagtgagctc atcaagataa ttagaaggcg cttacagctc aatgctaatc
301 aggccttctt cctgttggtg aacggacaca gcatggtcag cgtctccaca ccaatctcag
361 aggtgtatga gagtgagaaa gatgaagatg gattcctgta catggtctat gcctcccagg
421 agacgttcgg gatgaaattg tcagtgtaaa accagaaaaa atgcatctct tctagaattg
481 tttaaaccct taccaaggaa aaaaaagggg tgttaccaac tgagatcgat cagttcatcc
541 aatcacagat catgaaacag tagtgttccc acctaggagt gttaggaagt tgtgtttgtg
601 tttcaagcag aaaaactgag ctccaagtga gcacattcag ctttggaaac tatattattt
661 aatgtaggct agcttgtttt caaattttaa aagtttaaaa ataaaatact ttgcattcta
721 agttgccaat aaaatagacc ttcaagttat tttaatgctc ttttctcact aataggaact
781 tgtaattcca gcagtaattt aaaggctttc agagagaccc tgagtcttct cttcaggttc
841 acagaacccg ccgccttttt gggtagaagt tttctactca gctagagaga tctccctaag
901 aggatcttta ggcctgagtt gtgaagcgca acccccgcaa aacgcatttg ccatcacagt
961 tggcacaaac gcagggtaaa cgggctgtgt gagaaaacgg ccctgactgt aaactgctga
1021 aggtccctga ctcctaagag aaccacaccc aaagtcctca ctcttgcagg ggtagacatt
1081 tctggtttgg tttgttctct agatagttac acacataaag acaccactca aaaggaaact
1141 tgaataattt ataattttga tcgagtttct taaaagaccc tggagaaaga gtggcatttc
1201 ttctgtttca ggttttgtct gagttcaaac tagtgcctgt gttgttacgg aaagcagcag
1261 tgtaccagtg tcactctgga gtacagcggg agaaacacaa aatagtataa ctgaaaacat
1321 taacattcag acacactccc ttctgccttc cggcttaaag ctgtggatga tccacgtttt
1381 tgttttttta atgttaaatg tgtaactcag tattactgaa aaggtaccca cattttgaat
1441 agtagttatc actcttaggt cagacagcca tcagaattct cccacaccaa gtgcatgtca
1501 gttgtggaga aaacatagca aaaagagccg tacgctcttt acagatacta atgtcaagag
1561 ttaaacctcc tcaggttcaa cctgtgataa aagactagtg cttcccagta cttgcatggg
1621 gttcactatt tatagttttc ttgggagtat cacaggaaaa tcacaattac accactttag
1681 accctatgtg tagcaggtca caacttaccc ttgtgtgttt agatgtgtat gaaatacctg
1741 tatacgttag tgaaagctgt ttactgtaac ggggaaaacc agattctttg catctgggcc
1801 ctctactgat tgttaaagga gttcctgtca cctgctcccc ccacccccgc atgcgtctgt
1861 ccacttggct aacttttaat atgtgtattt ttacattatg tatattctta actggactgt
1921 ctcgtttaga ctgtatacat catatctgac attattgtaa ctaccgtgtg atcagtaaga
1981 ttcctgtaag aaatactgct ttttaagaaa aaaaataaca tgctgagggg tgacctatat
2041 cccatgtgag tggtcacttt atttatagga tctttaaaac atttttaatg aactaagttg
2101 aataaaggca caattaaaaa ctgtaaaaaa aaaaaaaaaa aa
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