LOCUS BC018555 2782 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens deltex homolog 2 (Drosophila), mRNA (cDNA clone
MGC:16941 IMAGE:4341568), complete cds.
ACCESSION BC018555
VERSION BC018555.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Lou Staudt
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: j Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308252.
FEATURES Location/Qualifiers
source 1..2782
/db_xref="H-InvDB:HIT000050709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16941 IMAGE:4341568"
/tissue_type="Lymph, lymphoma"
/clone_lib="NIH_MGC_85"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2782
/gene="DTX2"
/gene_synonym="KIAA1528"
/gene_synonym="RNF58"
/db_xref="GeneID:113878"
/db_xref="HGNC:HGNC:15973"
CDS 511..2379
/gene="DTX2"
/gene_synonym="KIAA1528"
/gene_synonym="RNF58"
/codon_start=1
/product="deltex homolog 2 (Drosophila)"
/protein_id="AAH18555.1"
/db_xref="GeneID:113878"
/db_xref="HGNC:HGNC:15973"
/translation="MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQ
QFVQQKGQRFGLGSLAHSIPLGQADPSLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQ
HSAPGRGVVWEWLSDDGSWTAYEASVCDYLEQQVARGNQLVDLAPLGYNYTVNYTTHT
QTNKTSSFCRSVRRQAGPPYPVTTIIAPPGHTGVACSCHQCLSGSRTGPVSGRYRHSM
TNLPAYPVPQHPPHRTASVFGTHQAFAPYNKPSLSGARSAPRLNTTNAWGAAPPSLGS
QPLYRSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQMPKPSRVQQA
LAGMTSVLMSAIGLPVCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPE
PEQVIKNYTEELKVPPDEDCIICMEKLSAASGYSDVTDSKAIGSLAVGHLTKCSHAFH
LLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILI
VYSIPHGIQGPEHPNPGKPFTARGFPRQCYLPDNAQGRKVLELLKVAWKRRLIFTVGT
SSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLAELAAQGVTEDCLEQQ"
BASE COUNT 547 a 928 c 794 g 513 t
ORIGIN
1 gcgacgccga gtttcactct ggctgccttc tcctgagagt cggagccaca gccagagccc
61 tgcccaggcc gagccggagc tgcagcccga gcgcggtggt gccctcagcc ccgtcctctt
121 gtcctcctca gcctcggtgc cttggaattt gtgtcgctga gtcagcaagc ctttcagatt
181 tgcccggttt ttgttgtttg tggtttgtat caagatggga actcaaacaa gtcattcctc
241 ctaaggagct ggtgtcttca tccagaaggg acagtttgtg ccagctctcc agagagaaaa
301 ggatctggta ctgttctgga gtggcctgta gcagacactg aaccaccagc cagctgcatt
361 tgttgtcctg gaagtcattg ccaactctgc cagtcacact ggggtcccca aagaagtcaa
421 gatctgccgg aggcgctggg caatgacccc gggactccag gccagagggg tctgaagctg
481 tttgggaaag cagcgggact ccttgggaag atggccatgg ccccaagccc ttccctggtg
541 caggtgtaca ccagccccgc ggctgtggcc gtgtgggaat ggcaggacgg gctgggcacc
601 tggcacccct acagtgccac cgtctgcagc ttcatcgagc agcagtttgt ccagcagaag
661 ggccaacgtt ttgggcttgg gagcctggcc cacagcatcc ccttgggcca ggcagacccc
721 tcgctggccc cttacattat tgacctcccc agctggaccc agttccgcca ggacaccggc
781 accatgcggg ctgtgcggag acacctgttc ccccagcact cagcccctgg ccgaggtgtc
841 gtctgggagt ggctgagcga cgatggctcc tggactgcct atgaagccag cgtctgtgac
901 tatctggagc agcaggtggc caggggcaac cagctcgtgg acttggcccc cctggggtac
961 aactacactg tcaactacac cacccacacg cagaccaaca agacttccag cttttgccgc
1021 agcgtgcggc gccaagcagg gccgccttac ccggtgacca ccatcatcgc tccgccgggc
1081 cacacaggcg tcgcctgctc ttgccaccag tgcctcagtg gcagcagaac tggccccgtg
1141 tcaggccgct accgccactc catgaccaac ctccctgcat accccgtccc ccagcacccc
1201 ccacacagga ccgcttctgt gtttgggacc caccaggcct ttgcaccgta caacaaaccc
1261 tcactctccg gggcccggtc tgcgcccagg ctgaacacca ccaacgcctg gggcgcagct
1321 cctccttccc tggggagcca gcccctctac cgctccagcc tctcccacct gggaccgcag
1381 cacctgcccc caggatcctc cacctccggt gcagtcagtg cctccctccc cagcggtccc
1441 tcaagcagcc cagggagcgt ccctgccact gtgcccatgc agatgccaaa gcccagcaga
1501 gtccagcagg cgctcgcagg catgacgagt gttctgatgt cagccattgg actccctgtg
1561 tgtcttagcc gcgcacccca gcccaccagc cctcccgcct cccgtctggc ttccaaaagt
1621 cacggctcag ttaagagatt gaggaaaatg tccgtgaaag gagcgacccc gaagccagag
1681 ccagagccag agcaggtcat aaaaaactac acggaagagc tgaaagtgcc cccagatgag
1741 gactgcatca tctgcatgga gaagctgtcc gcagcgtctg gatacagcga tgtgactgac
1801 agcaaggcaa tcgggtccct agctgtgggc cacctcacca agtgcagcca tgccttccac
1861 ctgctgtgcc tcctggccat gtactgcaac ggcaataagg atggaagtct gcagtgtccc
1921 tcctgcaaaa ccatctatgg agagaagacg gggacccagc cccagggaaa gatggaggta
1981 ttacggttcc agatgtcgct ccccggccac gaggactgcg ggaccatcct catagtttac
2041 agcattcccc atggtatcca gggccctgag caccccaatc ccggaaagcc gttcactgcc
2101 agagggtttc cccgccagtg ctaccttcca gacaacgccc agggccgcaa ggtcctagag
2161 ctcctgaagg tggcctggaa gaggcggctc atcttcacag tgggcacgtc cagcaccacg
2221 ggtgagacgg acaccgtggt atggaacgag atccaccaca agacagagat ggaccgcaac
2281 attacgggcc acggctatcc cgaccccaac tacctgcaga acgtgctggc tgagctggct
2341 gcccaggggg tgaccgagga ctgcctggag cagcagtgac ctcgcacccc agcacgcccg
2401 cctctggtgg ccaccccgct gccccatggc tggctgggtg gccaggcagg aagtgcccag
2461 cccgagaggc tgggaggttt gttgagggtg tggggtgtgc cccacctgaa gccggggctc
2521 cccctgcctg cctctctctc ctcctcccct ctgggaattg ggcagccctg ggcagttgta
2581 ctcatggggg cttaggatgc agctacctca gtgcgcaggg cccgtctgtc ctctgggggc
2641 tgcttcgggc ccgcggtgct cggggcctgg tgtggggcga gtagagactt ccccagcctg
2701 gacgggcgtg ggttctgggt cagcttcttt tacctcaatt ttgtttgcaa taaatgctct
2761 atagccaaaa aaaaaaaaaa aa
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