LOCUS BC018437 1519 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SEC22 vesicle trafficking protein homolog C (S. cerevisiae), mRNA (cDNA clone MGC:5373 IMAGE:3445481), complete cds. ACCESSION BC018437 VERSION BC018437.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1519) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1519) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 3 Row: p Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21536310. FEATURES Location/Qualifiers source 1..1519 /db_xref="H-InvDB:HIT000038344" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5373 IMAGE:3445481" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_10" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1519 /gene="SEC22C" /gene_synonym="MGC13261" /gene_synonym="MGC5373" /db_xref="GeneID:9117" /db_xref="HGNC:HGNC:16828" /db_xref="MIM:604028" CDS 119..871 /gene="SEC22C" /gene_synonym="MGC13261" /gene_synonym="MGC5373" /codon_start=1 /product="SEC22 vesicle trafficking protein homolog C (S. cerevisiae)" /protein_id="AAH18437.1" /db_xref="GeneID:9117" /db_xref="HGNC:HGNC:16828" /db_xref="MIM:604028" /translation="MSVIFFACVVRVRDGLPLSASTDFYHTQDFLEWRRRLKSLALRL AQYPGRGSAEGCDFSIHFSSFGDVACMAICSCQCPAAMAFCFLETLWWEFTASYDTTC IGLASRPYAFLEFDSIIQKVKWHFNYVSSSQMECSLEKIQEELKLQPPAVLTLEDTDV ANGVMNGHTPMHLEPAPNFRMEPVTALGILSLILNIMCAALNLIRGVHLAEHSLQVAH EEIGNILAFLVPFVACIFQDPRSWFCWLDQTS" BASE COUNT 378 a 345 c 353 g 443 t ORIGIN 1 ctgggccgag ccctcccggt cggctaagat tgctgaggag gcggcgggta gctggcaggc 61 gccgacttcc gaaggccgcc gtccgggcga ggtgtcctca tgacttctct tgtggaccat 121 gtccgtgatc ttttttgcct gcgtggtacg ggtaagggat ggactgcccc tctcagcctc 181 tactgatttt taccacaccc aagatttttt ggaatggagg agacggctca agagtttagc 241 cttgcgactg gcccagtatc caggtcgagg ttctgcagaa ggttgtgact ttagtataca 301 tttttcttct ttcggggacg tggcctgcat ggctatctgc tcctgccagt gtccagcagc 361 catggccttc tgcttcctgg agaccctgtg gtgggaattc acagcttcct atgacactac 421 ctgcattggc ctagcctcca ggccatacgc ttttcttgag tttgacagca tcattcagaa 481 agtgaagtgg cattttaact atgtaagttc ctctcagatg gagtgcagct tggaaaaaat 541 tcaggaggag ctcaagttgc agcctccagc ggttctcact ctggaggaca cagatgtggc 601 aaatggggtg atgaatggtc acacaccgat gcacttggag cctgctccta atttccgaat 661 ggaaccagtg acagccctgg gtatcctctc cctcattctc aacatcatgt gtgctgccct 721 gaatctcatt cgaggagttc accttgcaga acattcttta caggttgccc atgaggaaat 781 tggaaacatt ctggcttttc ttgttccttt cgtagcctgc attttccagg atccaaggag 841 ctggttctgc tggttggacc aaacctcgtg agccagccac ccctgaccca aatgaggaga 901 gctctgattc tcccatccgg gagcagtgat gtcaaacttc tgctgctggg gaaatctcat 961 cagcagggag cctgtggaaa agggcatgtc agtgaaatct gggaatggct ggattcggaa 1021 acatctgccc atgtgtattg atggcagagc tgttgcccac aagcgccttt tatttagggt 1081 aaaattaaca aatccattct attcctctga cccatgctta gtacatatga cctttaaccc 1141 ttacatttat atgattctgg ggttgcttca gaagtgttat ttcatgaatc attcatatga 1201 tttgatcccc caggattcta ttttgtttaa tgggcttttc tactaaaagc ataaaatact 1261 gaggctgatt tagtcagggc aaaaccattt actttacata ttcgttttca atacttgctg 1321 ttcatgttac acaagcttct tacggttttc ttgtaacaat aaatattttg agtaaataat 1381 gggtacattt taacaaactc agtagtacaa cctaaacttg tataaaagtg tgtaaaaatg 1441 tatagccatt tatatcctat gtataaatta aatgaggtgg cttcagaaat ggcagaataa 1501 atctaaaaaa aaaaaaaaa //