LOCUS BC018426 3574 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens up-regulated gene 4, mRNA (cDNA clone MGC:16942
IMAGE:4213413), complete cds.
ACCESSION BC018426
VERSION BC018426.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3574)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3574)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923541.
FEATURES Location/Qualifiers
source 1..3574
/db_xref="H-InvDB:HIT000038342"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16942 IMAGE:4213413"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3574
/gene="URG4"
/db_xref="GeneID:55665"
/db_xref="MIM:610337"
CDS 16..2784
/gene="URG4"
/codon_start=1
/product="up-regulated gene 4"
/protein_id="AAH18426.2"
/db_xref="GeneID:55665"
/db_xref="MIM:610337"
/translation="MASPGHSDLGEVAPEIKASERRTAVAIADLEWREMEGDDCEFRY
GDGTNEAQDNDFPTVERSRLQEMLSLLGLETYQVQKLSLQDSLQISFDSMKNWAPQVP
KDLPWNFLRKLQALNADARNTTMVLDVLPDARPVEKESQMEEEIIYWDPADDLAADIY
SFSELPTPDTPVNPLDLLCALLLSSDSFLQQEIALKMALCQFALPLVLPDSENHYHTF
LLWAMRGIVRTWWSQPPRGMGSFREDSVVLSRAPAFAFVRMDVSSNSKSQLLNAVLSP
GHRQWDCFWHRDLNLGTNAREISDGLVEISWFFPSGREDLDIFPEPVAFLNLRGDIGS
HWLQFKLLTEISSAVFILTDNISKKEYKLLYSMKESTTKYYFILSPYRGKRNTNLRFL
NKLIPVLKIDHSHVLVKVSSTDSDSFVKRIRAIVGNVLRAPCRRVSVEDMAHAARKLG
LKVDEDCEECQKAKDRMERITRKIKDSDAYRRDELRLQGDPWRKAAQVEKEFCQLQWA
VDPPEKHRAELRRRLLELRMQQNGHDPSSGVQEFISGISSPSLSEKQYFLRWMEWGLA
RVAQPRLRQPPETLLTLRPKHGGTTDVGEPLWPEPLGVEHFLREMGQFYEAESCLVEA
GRLPAGQRRFAHFPGLASELLLTGLPLELIDGSTLSMPVRWVTGLLKELHVRLERRSR
LVVLSTVGVPGTGKSTLLNTMFGLRFATGKSCGPRGAFMQLITVAEGFSQDLGCDHIL
VIDSGGLIGGALTSAGDRFELEASLATLLLGLSNVTVISLAETKDIPAAILHAFLRLE
KTGHMPNYQFVYQNLHDVSVPGPRPRDKRQLLDPPGDLSRAAAQMEKQGDGFRALAGL
AFCDPEKQHIWHIPGLWHGAPPMAAVSLAYSEAIFELKRCLLENIRNGLSNQNKNIQQ
LIELVRRL"
BASE COUNT 842 a 939 c 1057 g 736 t
ORIGIN
1 gacctcgctg cgctcatggc gtcgcccggg cattcagatt tgggagaagt agccccagaa
61 ataaaagcat cagagagacg aacagctgtg gccattgcag atttggaatg gagagaaatg
121 gaaggagatg attgcgagtt ccgttatgga gatggtacaa atgaggctca ggacaatgat
181 tttccaacag tggagagaag caggcttcaa gaaatgctgt cacttttggg cctagagacg
241 taccaggtcc agaaactcag cctccaggac tctctgcaga tcagttttga cagtatgaag
301 aactgggccc ctcaggttcc caaagacttg ccctggaatt tcctcaggaa gttgcaggcc
361 ctcaatgctg atgccaggaa taccactatg gtgctggacg tgctcccaga cgccaggcct
421 gtggagaagg agagccagat ggaagaggag atcatctact gggacccagc tgatgacctt
481 gctgccgaca tttattcctt ttctgagctg cccacccctg atacgccagt gaacccctta
541 gaccttctct gtgccctgct gctctcctca gacagtttcc tgcaacaaga aatagcgttg
601 aaaatggccc tctgccagtt tgcactccca ctcgtgttgc ctgactcgga gaaccactac
661 catacatttc tgctgtgggc catgcggggc attgtgagga catggtggtc ccagccccca
721 aggggcatgg ggagcttccg ggaagacagc gtggtcttgt ccagggcgcc cgccttcgcc
781 ttcgtgcgca tggacgtcag tagcaactcc aagtcccagc ttctcaacgc cgtcctcagc
841 ccgggccaca ggcagtggga ctgcttctgg catcgggacc tcaacttggg caccaatgcc
901 cgggagattt cggatgggtt ggtagaaatt tcctggtttt ttcccagcgg aagggaggac
961 ttggacattt tcccagaacc tgtggccttt ctgaacctga gaggtgacat cgggtctcac
1021 tggctgcagt ttaagctctt gacagaaatc tcctccgctg tgtttatatt gactgacaat
1081 atcagtaaga aggaatacaa attgctgtac tccatgaagg agtcaaccac aaaatactac
1141 ttcatcctga gtccctaccg tgggaagcgc aacacaaacc tgagatttct gaataagtta
1201 attcctgtgc tgaaaataga ccactcacat gtcctggtaa aggtcagcag cactgacagc
1261 gacagcttcg tgaagaggat ccgggccatc gttgggaatg tgctgcgggc accctgcagg
1321 cgggtatctg tggaggacat ggcgcacgca gcccgcaaac tgggcctaaa ggtcgacgag
1381 gactgtgagg agtgtcagaa agcgaaagac cggatggaga ggattaccag gaaaatcaaa
1441 gactcggatg cctacagaag ggacgagctg aggctgcagg gggacccctg gagaaaggca
1501 gcccaagtgg agaaggagtt ctgccagctc cagtgggccg tggacccccc tgagaagcac
1561 agggctgagc tgaggcggcg gctgctagaa cttcgaatgc agcagaacgg ccatgatccc
1621 tcctcggggg tgcaggagtt catctcgggg atcagcagcc cctccttgag tgagaagcag
1681 tacttcctga ggtggatgga gtggggcctg gcacgggtgg cccagccgcg actgagacag
1741 cctccggaga cgcttctcac cctgagacca aagcacgggg gcaccacaga cgtgggggag
1801 ccgctctggc ctgagcccct aggggtggaa cacttcttgc gggagatggg acagttttat
1861 gaggctgaga gctgtcttgt ggaggcaggg aggctgccgg caggccagag gcgttttgcc
1921 cacttcccag gcttggcctc ggagctgctg ctgacagggc tgcctctgga gctaatcgat
1981 gggagcacgc tgagcatgcc cgtccgctgg gtcacagggc tcctgaagga gctgcatgtc
2041 cgactggaga gacggtcaag gctggtggtt ctgtcaaccg tcggggtgcc aggcacgggc
2101 aagtccacac tcctcaacac catgtttggg ctgcggtttg ccacagggaa gagctgcggt
2161 cctcgagggg ccttcatgca gctcatcaca gtggctgagg gcttcagcca ggacctgggc
2221 tgtgaccaca tcctggtgat agactccggg ggcttgatag gtggggcctt gacgtcagct
2281 ggggacagat ttgagctgga ggcttccttg gccactctgc tcctgggact gagcaatgtc
2341 accgtgatca gtctagctga aaccaaggac attccagcag ctattctgca tgcatttctg
2401 aggttagaaa aaacggggca catgcccaac taccagtttg tataccagaa ccttcatgat
2461 gtatctgttc ccggccctag gcccagagac aagagacagc tcctggatcc acctggtgac
2521 ctgagcaggg ctgcagccca gatggagaaa cagggcgacg gcttccgggc actggcaggc
2581 ctggccttct gcgaccctga gaagcagcac atctggcaca tcccaggcct gtggcacgga
2641 gcacctccca tggccgcagt gagcttggcc tacagtgaag ccatatttga attgaagaga
2701 tgcctactcg aaaacatcag gaacggcttg tcgaaccaaa acaaaaacat ccagcagctc
2761 attgagctgg tgagacggct gtgagtgtgc agagaaaccc agttcaggtg taggaggctg
2821 ctgtgggcag ccctgtctga tggggcaccc gtgtggggct gtgctctggt gcctgagaat
2881 ggctggtgcc caatcgacat gagaagacga gcaaaagaca gagggtttgg agtctcctca
2941 acagtgttaa aagaggaagt gacctcacag accagctcag agatgttacc aagaatatca
3001 cagcccccag ggtagggaga caagcagcag tttgttctgt ctcagctcct gtcaaggatc
3061 ctgcggggtg ggccctctgt atagctgctc tctgtcactg gcccctggag tgggagcagc
3121 gtccttagtc actgcaggcc caggcgggca ggtggtccca ggacagaggt ggggaagttg
3181 tcctgaggaa gcagaagtag gccttgctcc cgcccaaccc aagggcctcc agtggaccag
3241 cattcaagat gtgagtgccc gtggtgtgca aggcactccc atggcaccgt atttattgac
3301 tgatctgtga aggcttccct gacccctgcc caggaagagt tcactggtcg ctctgttgtg
3361 ccccacagca ctttgttata cctctgccac acacttcacg cagcgcgttg taactcatgt
3421 gtttacatgt ctgtcccccc agactgtgag ctccttgagg gcagggactg tacattctcc
3481 agctctgtgt ccccagggcc tggcacattg tagacgctta ataaatgtct gttaaatgaa
3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//