LOCUS       BC018403                3519 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens ubiquilin 4, mRNA (cDNA clone MGC:16849
            IMAGE:4214386), complete cds.
ACCESSION   BC018403
VERSION     BC018403.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3519)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3519)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-DEC-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Jul 7, 2004 this sequence version replaced BC018403.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: n Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 40538798.
FEATURES             Location/Qualifiers
     source          1..3519
                     /db_xref="H-InvDB:HIT000089602"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:16849 IMAGE:4214386"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3519
                     /gene="UBQLN4"
                     /gene_synonym="A1U"
                     /gene_synonym="UBIN"
                     /db_xref="GeneID:56893"
                     /db_xref="HGNC:HGNC:1237"
                     /db_xref="MIM:605440"
     CDS             13..1818
                     /gene="UBQLN4"
                     /gene_synonym="A1U"
                     /gene_synonym="UBIN"
                     /codon_start=1
                     /product="ubiquilin 4"
                     /protein_id="AAH18403.1"
                     /db_xref="GeneID:56893"
                     /db_xref="HGNC:HGNC:1237"
                     /db_xref="MIM:605440"
                     /translation="MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRR
                     FKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTP
                     DPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILS
                     GFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMMSNPDLMRHM
                     IMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIP
                     GGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWS
                     PSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISE
                     NPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQ
                     MQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAG
                     STPEAPTSSPATPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQL
                     NSMGFINREANLQALIATGGDINAAIERLLGSQLS"
BASE COUNT          806 a         1019 c          916 g          778 t
ORIGIN      
        1 ggcggcggcg gcatggcgga gccgagcggg gccgagacga ggccccccat tcgggtcacc
       61 gtcaagaccc ccaaggacaa ggaggaaatt gtgatctgcg atcgagcctc ggtcaaggag
      121 ttcaaagagg aaatctcccg gaggtttaag gctcagcagg atcagctggt cctgatcttc
      181 gcaggcaaga tcctcaagga tggggacaca ctgaaccagc acggaatcaa ggacgggctc
      241 actgtccatc tggtcatcaa gacccctcag aaggctcaag atccagctgc tgccactgct
      301 tcttccccct ctacacctga ccctgcctca gcaccctcca ccacgcctgc ttcacccgcc
      361 acccctgccc agccctccac ctctggcagt gcctcttcag atgctggcag tggaagccgg
      421 aggagcagtg gtggggggcc ctctccgggg gctggggagg gatcccccag tgctactgcg
      481 tccatactct ctggctttgg gggcatcctg gggctgggca gcctaggcct gggctctgcc
      541 aacttcatgg agctgcagca gcagatgcag cggcagctga tgtccaatcc tgagatgctg
      601 tcacagatca tggagaaccc cctggtccag gatatgatgt ctaaccctga tctgatgcgt
      661 cacatgatta tggccaaccc ccagatgcag cagttgatgg agcggaaccc tgagatcagc
      721 cacatgctca ataaccctga actcatgagg cagacaatgg agcttgctcg gaatccagcc
      781 atgatgcaag agatgatgcg gaaccaggac cgggccctga gcaaccttga gagcatccct
      841 ggagggtata atgccctccg ccgcatgtac acggacatcc aggagcccat gttcagtgct
      901 gcccgggaac agtttggcaa caatcccttc tcttccctgg ccgggaactc cgacagctca
      961 tcctcccagc ctctgcggac tgagaatcga gagcccctcc ctaacccctg gagcccctcg
     1021 ccccccacct cccaggcccc cgggtccggt ggggagggca ccggaggatc ggggaccagc
     1081 caggtgcacc cgacagtctc gaaccccttt gggatcaatg cggctagcct ggggtcaggg
     1141 atgttcaata gcccagaaat gcaagccctc ctccagcaga tctctgagaa cccccagctg
     1201 atgcagaatg tgatctcagc accctacatg cgcagcatga tgcagacgct tgcccagaac
     1261 cccgactttg ctgctcagat gatggtgaat gtgccgctct tcgcggggaa cccccaactg
     1321 caggagcagc tccgcctgca gctcccagtc ttcctgcagc agatgcagaa cccagagtca
     1381 ctctccatcc ttaccaatcc ccgagccatg caggcattgc tgcagatcca gcagggacta
     1441 cagaccttgc agaccgaggc ccctgggctg gtacccagcc ttggctcctt tgggatatcc
     1501 cggaccccag caccctcagc aggcagcaac gcagggtcta cgcccgaggc ccccacttcc
     1561 tcaccagcca cgccagccac atcttctcca acaggggctt ccagcgccca gcagcaactc
     1621 atgcagcaga tgatccagct tttggctgga agtggaaact cacaggtgca gacgccagaa
     1681 gtgagatttc agcagcagct ggagcagctc aactccatgg gcttcatcaa tcgtgaggct
     1741 aacctgcagg ccctgattgc cacaggaggg gacatcaacg cagctatcga gagactgctg
     1801 ggctcccagc tctcctaatc cctcggccca tgcctcctgc ctctcccctc cctcgatgtc
     1861 agcattcggt tcttctgtca atccttaccc tctgcagctt gtcctccctt ccgtcttctc
     1921 cctcatcctt tccaaacagc agggtgactt tagaggcatg ggctccaacc ccttagctct
     1981 gtctgagaat tatggtttta ctgctacgtc tctaacagac tcttctctcc tggtctcctt
     2041 gagcagtgct acttaaacag ttttcacagt ttcattgatt gactctacct ccttgcccca
     2101 caccactttt gcaatcttta aactttcagt ggctgtgcag agtcgaggga ggaaccagct
     2161 ctctggttta ctggaacata gtcttccatc tataccacta gggttttgtc ttatgtttac
     2221 ttttggtaac tctcttcctt ctttttctcc ctacccccca acccctagcc caaccaatgc
     2281 tagaatttct tgctctgaag gaggagcagg tgaaacaggt ggtaattttc cttctcggcc
     2341 cctattctgg ttcattcagc actttttggt gggaactgtt ggaaattcca gggtaaggag
     2401 gaagatgcct gttctccctg tctgaagagg gagatgagac agctctctgg acaggaatta
     2461 acaaacgctg gagcagccca gaggaaattc gtgtgaaaga ggagggaatg agattattcg
     2521 gaggaaggga atgggggaga cagcctgagt aaaaggcttg gaagttggaa ttagcagtgg
     2581 ggagcagaag cactcatagc tcttttaggc agaagaatcc aggcccgagc tggcagaaga
     2641 gacttagaga tgctaatgga atttaaactg aaaaaaggag cccaatgaag ctaagcgcca
     2701 cgccccacaa ggggtcatat tggctttagt tcctcaagca tatgtgctta tatgcacaca
     2761 cacacacatt tccatggacc caggtcttgc ttgtgtcccc aggcaccagt agtttgagcc
     2821 cccctcaaaa gacatgaagg gggttggggt ctgtgtgagt agtggggagg tgcatgtgta
     2881 tccacatgtg tgcatacact cttaagttgg gtgggaagtg gattccttgt tggtttctgg
     2941 ttcagagtgc tctcccacca ccagagacaa gtgggtaaaa aggtcagtcc attgcaggaa
     3001 tatatatccg ggagagctag gtcccttggg gctctggatg ctgggtaacc cagaggtaat
     3061 gtgggtaccc tttctgaagc tgtcagggct gtgactagca cccttatcac ccctcactgc
     3121 cttgtgggaa tagtagaggg ttttttttcc tccagagccc ctggcctttc agtttttaac
     3181 tatttccctc caggccagaa agttttcttt gaggaaggag aggagagggt ggcaatgatg
     3241 cctttgatct ggaattggac atttctctgt cagagcacag aggaggctca tatcacctct
     3301 tccctctcct acttggccca gctgcttgga ggaccgaccc catggctgag aatatgacgg
     3361 caagaggaac agagtttgct ccaagtggga aagggtccca agcagtccag agaagatgtc
     3421 tgtgtggctt tccctccctg cctcccccag ctcccacact ggcctttgta aataaatggc
     3481 gtggtctttg taaaaaaaaa aaaaaaaaaa aaaaaaaaa
//