LOCUS BC018396 2728 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KIAA0408, mRNA (cDNA clone MGC:16962 IMAGE:4184033),
complete cds.
ACCESSION BC018396
VERSION BC018396.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59806362.
FEATURES Location/Qualifiers
source 1..2728
/db_xref="H-InvDB:HIT000050706"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16962 IMAGE:4184033"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2728
/gene="KIAA0408"
/gene_synonym="RP3-403A15.2"
/db_xref="GeneID:9729"
/db_xref="HGNC:HGNC:21636"
CDS 175..2259
/gene="KIAA0408"
/gene_synonym="RP3-403A15.2"
/codon_start=1
/product="KIAA0408"
/protein_id="AAH18396.2"
/db_xref="GeneID:9729"
/db_xref="HGNC:HGNC:21636"
/translation="MDLHKQWENTETNWHKEKMELLDQFDNERKEWESQWKIMQKKIE
ELCREVKLWRKININERAKIIDLYHEKTIPEKVIESSPNYPDLGQSEFIRTNHKDGLR
KENKREQSLVSGGNQMCKEQKATKKSKVGFLDPLATDNQKECEAWPDLRTSEEDSKSC
SGALSTALEELAKVSEELCSFQEEIRKRSNHRRMKSDSFLQEMPNVTNIPHGDPMINN
DQCILPISLEKEKQKNRKNLSCTNVLQSNSTKKCGIDTIDLKRNETPPVPPPRSTSRN
FPSSDSEQAYERWKERLDHNSWVPHEGRSKRNYNPHFPLRQQEMSMLYPNEGKTSKDG
IIFSSLVPEVKIDSKPPSNEDVGLSMWSCDIGIGAKRSPSTSWFQKTCSTPSNPKYEM
VIPDHPAKSHPDLHVSNDCSSSVAESSSPLRNFSCGFERTTRNEKLAAKTDEFNRTVF
RTDRNCQAIQQNHSCSKSSEDLKPCDTSSTHTGSISQSNDVSGIWKTNAHMPVPMENV
PDNPTKKSTTGLVRQMQGHLSPRSYRNMLHEHDWRPSNLSGRPRSADPRSNYGVVEKL
LKTYETATESALQNSKCFQDNWTKCNSDVSGGATLSQHLEMLQMEQQFQQKTAVWGGQ
EVKQGIDPKKITEESMSVNASHGKGFSRPARPANRRLPSRWASRSPSAPPALRRTTHN
YTISLRSEALMV"
BASE COUNT 971 a 528 c 570 g 659 t
ORIGIN
1 ctcatcttac caagaccaaa ttcaataaga agcccaaaca ctaaaatatt tcaggcttta
61 ttttaaaggc aagtgagact gcttcaaata aaacaacttc aagcttccaa gaaacagtta
121 agaggaggca gagaagagca gaaacacttc tttgctgaca cttacactgt tgccatggac
181 ctacataagc agtgggagaa cacagagact aactggcata aggaaaagat ggaattactg
241 gaccagtttg acaatgaaag aaaggaatgg gaaagtcaat ggaagattat gcagaagaaa
301 atagaagagc tttgccggga agtaaagctt tggaggaaaa tcaatatcaa tgaacgtgct
361 aagatcattg atctttacca tgagaagacc attccagaga aagtgataga atcttcccca
421 aattaccccg atttaggaca aagtgaattt ataaggacga atcacaaaga tggtctgaga
481 aaagaaaata aaagagagca gagcttagtc agtggaggaa atcaaatgtg taaggaacaa
541 aaagcaacaa aaaaatcaaa agtagggttt ttggatcctt tggctacaga caaccaaaag
601 gaatgtgagg cctggcctga cctgaggact tctgaggaag acagcaagag ctgttctggc
661 gccctcagta cagctcttga agaacttgcg aaggtgagtg aagaattatg cagctttcaa
721 gaggaaattc gaaagcggtc taaccataga aggatgaagt cagattcttt tctccaggaa
781 atgccaaatg taactaatat acctcatggg gaccccatga tcaacaatga ccagtgcatt
841 cttccaatca gtttagaaaa agaaaaacag aaaaatagga agaatctgag ctgtaccaat
901 gtgctccaga gcaattctac gaaaaaatgt ggaattgata caatcgattt aaaaagaaat
961 gaaactccac cagttcctcc tccaagaagc acctctcgaa attttcccag ctcggattct
1021 gaacaagcct atgaaagatg gaaggaaagg ttagaccaca acagctgggt gccccatgag
1081 ggtcgaagta aaaggaatta caaccctcac ttccctttga gacaacaaga gatgtctatg
1141 ttgtatccaa atgaagggaa aacttcgaaa gatggtatca tcttttcctc tttggtacca
1201 gaagtcaaaa tagatagcaa gcctccaagt aatgaagatg ttggacttag catgtggtca
1261 tgtgacattg ggataggtgc aaaaaggagc ccctctactt cgtggtttca gaaaacctgc
1321 tctaccccca gtaatccaaa atatgaaatg gtgatcccag atcaccctgc taaatctcat
1381 cctgatcttc atgtaagtaa tgactgtagc tcctcagtag cagagagcag tagcccactt
1441 agaaatttca gttgtggctt tgaaaggact acaaggaatg agaagctggc agcaaagact
1501 gatgaattta acagaactgt atttagaaca gatagaaatt gtcaggcaat acagcaaaat
1561 cacagctgct caaaatcatc ggaggatctc aagccctgtg atacctcatc tactcacaca
1621 ggtagcatat cacaaagtaa cgatgtgtcc ggtatttgga aaaccaatgc ccacatgcct
1681 gtgcccatgg aaaatgtgcc tgataatccc accaagaaat ccacaacagg cctagtaaga
1741 caaatgcagg gacacctaag tcctcgcagt tatcgaaata tgctccacga gcatgactgg
1801 agaccgagta atttgtctgg ccgtccgagg tcagctgatc ccaggtcaaa ttatggtgtt
1861 gtggaaaagc tgctgaaaac ctatgagaca gcaacagagt ctgcattgca aaattctaag
1921 tgcttccagg ataattggac caaatgtaat tctgatgtca gtggtggtgc cacattaagt
1981 cagcatttag aaatgctcca aatggaacaa cagtttcagc aaaagacagc tgtgtggggg
2041 ggacaggaag tgaagcaagg aatagatccg aaaaagataa cagaggaatc catgtcagtg
2101 aacgcctcac atggaaaagg attttcccga cctgctagac cagcaaatcg tcgtctcccc
2161 tccagatggg catccagatc tccatctgca ccccctgcct tgcggagaac tacccacaac
2221 tataccattt ctctgcgatc cgaagcattg atggtttaag tctttggcct ggattgctat
2281 attacagaag ttctagtccc acttgtcaaa cagagcattc tgagtgttta caggcggacc
2341 tgttctcttc cgacaagcaa tttgaatctt aactttccat cagtcttcag tgtttttaat
2401 ctaaggaata attatcttcc tgcattttga tttcttagat cagaattttt taatgccatc
2461 ctcattagtt ttccaataca atataagttg aaacaatgta caatattgta tattctttgt
2521 tgcaagtggc agaaagtaag gttatgtgca tggccatgtg tttgtaggtg catgtgttga
2581 aataggaagt atcctagtat gtatttagat atgaaaaact tatgtgctag tgttgacttt
2641 gaaattataa catgtatacc tataaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//