LOCUS BC018370 3018 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fibronectin leucine rich transmembrane protein 1, mRNA
(cDNA clone MGC:21624 IMAGE:4214494), complete cds.
ACCESSION BC018370
VERSION BC018370.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3018)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3018)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48762940.
FEATURES Location/Qualifiers
source 1..3018
/db_xref="H-InvDB:HIT000038338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21624 IMAGE:4214494"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3018
/gene="FLRT1"
/gene_synonym="MGC21624"
/db_xref="GeneID:23769"
/db_xref="HGNC:HGNC:3760"
/db_xref="MIM:604806"
CDS 342..2366
/gene="FLRT1"
/gene_synonym="MGC21624"
/codon_start=1
/product="fibronectin leucine rich transmembrane protein
1"
/protein_id="AAH18370.1"
/db_xref="GeneID:23769"
/db_xref="HGNC:HGNC:3760"
/db_xref="MIM:604806"
/translation="MVVAHPTATATTTPTATVTATVVMTTATMDLRDWLFLCYGLIAF
LTEVIDSTTCPSVCRCDNGFIYCNDRGLTSIPADIPDDATTLYLQNNQINNAGIPQDL
KTKVNVQVIYLYENDLDEFPINLPRSLRELHLQDNNVRTIARDSLARIPLLEKLHLDD
NSVSTVSIEEDAFADSKQLKLLFLSRNHLSSIPSGLPHTLEELRLDDNRISTIPLHAF
KGLNSLRRLVLDGNLLANQRIADDTFSRLQNLTELSLVRNSLAAPPLNLPSAHLQKLY
LQDNAISHIPYNTLAKMRELERLDLSNNNLTTLPRGLFDDLGNLAQLLLRNNPWFCGC
NLMWLRDWVKARAAVVNVRGLMCQGPEKVRGMAIKDITSEMDECFETGPQGGVANAAA
KTTASNHASATTPQGSLFTLKAKRPGLRLPDSNIDYPMATGDGAKTLAIHVKALTADS
IRITWKATLPASSFRLSWLRLGHSPAVGSITETLVQGDKTEYLLTALEPKSTYIICMV
TMETSNAYVADETPVCAKAETADSYGPTTTLNQEQNAGPMASLPLAGIIGGAVALVFL
FLVLGAICWYVHQAGELLTRERAYNRGSRKKDDYMESGTKKDNSILEIRGPGLQMLPI
NPYRAKEEYVVHTIFPSNGSSLCKATHTIGYGTTRGYRDGGIPDIDYSYT"
BASE COUNT 663 a 994 c 829 g 532 t
ORIGIN
1 caaggaggct gctgattgtg gcccacagcc tcatctgaac gccaggagac caggataccg
61 aggcaccgga tcccctctct gtgccctggg gagccccagt gctgcccagt caccccaggg
121 ctgaggtctg cgtccctagt ggtgcaaggc ctggtaggac cacggggcag gtaatgtgag
181 cgccatctga gctcacggtg tcctgagtcg cggcttcgtg actttggcag gggcctccgg
241 accagtgacc ccagtcaaac ccagagggtc ttgggcggca gcgacgaagg aggtattcag
301 gctccaggcc aggtggggcc ggacgccccc agccatccac catggtggtg gcacacccca
361 ccgccactgc caccaccacg cccactgcca ctgtcacggc caccgttgtg atgaccacgg
421 ccaccatgga cctgcgggac tggctgttcc tctgctacgg gctcatcgcc ttcctgacgg
481 aggtcatcga cagcaccacc tgcccctcgg tgtgccgctg cgacaacggc ttcatctact
541 gcaacgaccg gggactcaca tccatccccg cagatatccc tgatgatgcc accaccctct
601 acctgcagaa caaccagatc aacaacgccg gcatccccca ggacctcaag accaaggtca
661 acgtgcaggt catctaccta tacgagaatg acctggatga gttccccatc aacctgcccc
721 gctccctccg ggagctgcac ctgcaggaca acaatgtgcg caccattgcc agggactcgc
781 tggcccgcat cccgctgctg gagaagctgc acctggatga caactccgtg tccaccgtca
841 gcattgagga ggacgccttc gccgacagca aacagctcaa gctgctcttc ctgagccgga
901 accacctgag cagcatcccc tcggggctgc cgcacacgct ggaggagctg cggctggatg
961 acaaccgcat ctccaccatc ccgctgcatg ccttcaaggg cctcaacagc ctgcggcgcc
1021 tggtgctgga cggtaacctg ctggccaacc agcgtatcgc cgacgacacc ttcagccgcc
1081 tacagaacct cacagagctc tcgctggtgc gcaattcgct ggccgcgcca cccctcaacc
1141 tgcccagcgc ccacctgcag aagctctacc tgcaggacaa tgccatcagc cacatcccct
1201 acaacacgct ggccaagatg cgtgagctgg agcggctgga cctgtccaac aacaacctga
1261 ccacgctgcc ccgcggcctg ttcgacgacc tggggaacct ggcccagctg ctgctcagga
1321 acaacccttg gttttgtggc tgcaacctca tgtggctgcg ggactgggtg aaggcacggg
1381 cggccgtggt caacgtgcgg ggcctcatgt gccagggccc tgagaaggtc cggggcatgg
1441 ccatcaagga cattaccagc gagatggacg agtgttttga gacggggccg cagggcggcg
1501 tggccaatgc ggctgccaag accacggcca gcaaccacgc ctctgccacc acgccccagg
1561 gttccctgtt taccctcaag gccaaaaggc cagggctgcg cctccccgac tccaacattg
1621 actaccccat ggccacgggt gatggcgcca agaccctggc catccacgtg aaggccctga
1681 cggcagactc catccgcatc acgtggaagg ccacgctccc cgcctcctct ttccggctca
1741 gttggctgcg cctgggccac agcccagccg tgggctccat cacggagacc ttggtgcagg
1801 gggacaagac agagtacctg ctgacagccc tggagcccaa gtccacctac atcatctgca
1861 tggtcaccat ggagaccagc aatgcctacg tagctgatga gacacccgtg tgtgccaagg
1921 cagagacagc cgacagctat ggccctacca ccacactcaa ccaggagcag aacgctggcc
1981 ccatggcgag cctgcccctg gcgggcatca tcggcggggc agtggctctg gtcttcctct
2041 tcctggtcct gggggccatc tgctggtacg tgcaccaggc tggcgagctg ctgacccggg
2101 agagggccta caaccggggc agcaggaaaa aggatgacta tatggagtca gggaccaaga
2161 aggataactc catcctggaa atccgcggcc ctgggctgca gatgctgccc atcaacccgt
2221 accgcgccaa agaggagtac gtggtccaca ctatcttccc ctccaacggc agcagcctct
2281 gcaaggccac acacaccatt ggctacggca ccacgcgggg ctaccgggac ggcggcatcc
2341 ccgacataga ctactcctac acatgatgcc cgcccacccg ggctgccccg cctcagcccc
2401 agctgccctg gcgtggccat gtggctttgc ccagcctgct gcaatccaag agagcaagga
2461 agagaaattc catgggtgac tttcctccgc agaaagcaaa gtttggggag ggctgacgat
2521 tttgtagaac acaacagtga caattttttt taaaagaata gaaggcagga gggggaattc
2581 gacattgttg aagacataat ttataccaag ttatgccagt tggggaggga aggactaaaa
2641 ataatattgc aggcagggct gggttgggtt tttttttttt ttcccccctg aactggaagg
2701 atactacctg tacaacatct gtggacacct catgctctgt tcaaggccat cacaaaggaa
2761 ccgccaggga gaagcagccg gctctcaaag ctcccacgca gctctcccgc cactggccac
2821 tcgctggcga cccgatggaa ggttttcagg ctcctcacaa aggagagagg gaagaaaaga
2881 tcttttgccc tggagatatg gtcctgaaat ctctcccctg gcttattcca taccatttcc
2941 cttgcagatt tgcagaaaca tggcatcttt cactgcattc tttgaacaat catgtagtcg
3001 attaaaaaaa aaaaaaaa
//