LOCUS BC018361 2507 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F, mRNA (cDNA clone MGC:21849 IMAGE:4215248), complete cds. ACCESSION BC018361 VERSION BC018361.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2507) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2507) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: h Column: 8. FEATURES Location/Qualifiers source 1..2507 /db_xref="H-InvDB:HIT000038337" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21849 IMAGE:4215248" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2507 /gene="SEMA4F" /gene_synonym="M-SEMA" /gene_synonym="m-Sema M" /gene_synonym="m-Sema-M" /gene_synonym="PRO2353" /gene_synonym="SEMAW" /db_xref="GeneID:10505" /db_xref="MIM:603706" CDS 89..1936 /gene="SEMA4F" /gene_synonym="M-SEMA" /gene_synonym="m-Sema M" /gene_synonym="m-Sema-M" /gene_synonym="PRO2353" /gene_synonym="SEMAW" /codon_start=1 /product="SEMA4F protein" /protein_id="AAH18361.1" /db_xref="GeneID:10505" /db_xref="MIM:603706" /translation="MPASAARPRPGPGQPTASPFPLLLLAVLSGPVSGRVPRSVPRTS LPISEADSCLTRFAVPHTYNYSVLLVDPASHTLYVGARDTIFALSLPFSGERPRRIDW MVPEAHRQNCRKKGKKEGDLGGRKTLQQRWTTFLKADLLCPGPEHGRASSVLQDVAVL RPELGAGTPIFYGIFSSQWEGATISAVCAFRPQDIRTVLNGPFRELKHDCNRGLPVVD NDVPQPRPGECITNNMKLRHFGSSLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTD TAYLRVVAHRVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVEN MKLYHSWLLVGSRTEVTQVNTTNCGRLQSCSECILAQDPVCAWSFRLDECVAHAGEHR GLVQDIESADVSSLCPKEPGERPVVFEVPVATAAHVVLPCSPSSAWASCVWHQPSGVT ALTPRRDGLEVVVTPGAMGAYACECQEGGAAHVVAAYSLVWGSQRDAPSRAHTVGAGL AGFFLGILAASLTLILIGRRQQRRRQRELLARDKVGLDLGAPPSGTTSYSQDPPSPSP EDERLPLALAKRGSGFGGFSPPFLLDPCPSPAHIRLTGAPLATCDETSI" BASE COUNT 498 a 727 c 717 g 565 t ORIGIN 1 ggacccgagt ggggccgagg ccagtagccc cggggccctg agcagaggcc gtagcttgcg 61 ccgcacccgc ggccaggcgg agccaaagat gccggcctct gctgcgcggc cccgcccggg 121 tcccgggcag cctacagcct cgcccttccc gctactgctg ctggcggtgc tgagcggccc 181 ggtatccggc cgcgtccccc gctcggtgcc cagaacctcg cttccaatct ctgaggctga 241 ctcctgtctc acccggttcg cagtccctca cacatacaat tactctgttc tccttgtgga 301 tcctgcctcc cacacacttt atgttggcgc ccgggacacc atcttcgctt tatccctgcc 361 cttctcaggg gagagacccc gcaggattga ctggatggtt cctgaggctc acagacagaa 421 ctgtaggaag aaaggcaaga aagaggggga cctcgggggc cggaagaccc tccagcagag 481 atggacgacg tttttgaaag ctgacctgct ctgtccaggg cctgagcatg gccgggcctc 541 cagtgtcctg caggatgttg ctgtgcttcg acctgagctt ggggcaggga ctcccatctt 601 ttatggcatc ttttcttccc agtgggaggg ggctactatc tctgctgtct gtgccttccg 661 accacaagac attcggacag tgctgaatgg tcccttcaga gaactaaaac atgactgcaa 721 cagaggactg cctgtcgtgg acaatgatgt gccccagccc agacctggag agtgcatcac 781 caacaacatg aagctccggc actttggctc atctctctcc ctgcctgacc gcgtactcac 841 cttcatccgg gaccacccac tcatggacag gccagtgttt ccagctgatg gccaccccct 901 gctggtcact acagatacag cctatctcag agtcgtggcc cacagggtga ccagcctctc 961 agggaaagag tatgatgtgc tctacctggg gacagaggat ggacacctcc accgagcagt 1021 gcggatcgga gctcagctca gcgttcttga agatctggcc ttattcccag agccacagcc 1081 agttgagaac atgaaattgt accacagctg gctcctggtt ggctcccgta ctgaggtgac 1141 acaagtgaat acaaccaact gtggccgtct ccagagctgc tcagagtgca tcctggccca 1201 ggacccagtc tgtgcctgga gcttccggct ggatgagtgt gtggcccatg ccggggagca 1261 ccgagggttg gtccaagaca tagagtcagc agatgtctcc tctttgtgtc ctaaagagcc 1321 tggagaacgt ccagtagtgt ttgaagttcc cgtggctaca gctgcgcatg tggtcttgcc 1381 atgttctcca agctcagcat gggcatcctg tgtgtggcac cagcccagtg gagtgactgc 1441 actcaccccc cggcgggatg gactggaggt ggtggtgacc ccaggggcca tgggcgctta 1501 tgcctgtgaa tgtcaggagg gtggggcagc ccatgtggta gcagcttaca gcttggtatg 1561 gggcagccag cgagatgctc cgagccgggc ccacacagtg ggggcgggac tggctggctt 1621 cttcttgggg attctcgcag catccctgac tctcattctg attggtcggc gtcagcagcg 1681 acggcgacag agggaacttc tggctagaga caaggtgggc ctggacctgg gggctccacc 1741 ttctgggacc acaagctaca gccaagaccc tccctccccc tctcctgaag atgagcggtt 1801 gccgctggcc ctggccaaga ggggcagtgg ctttggtgga ttctcaccac ccttcctgct 1861 tgatccttgc ccaagcccag cccacattcg gctaactggg gctcctctag ccacatgtga 1921 tgaaacatcc atctagagct gggcaaatga ccactagtgt ataagtgatc actggaacgg 1981 agtgaccact gagatgctgg gggtcactgg gcctggaaga ccatcccagc ctctgagttc 2041 tctttgagta tgagtgatta cttggatttt agtatctgtt ctctctgagc ctggatgggc 2101 ttggggccag acctttgcct gattcctgat tcccatgaga aatcagaact gctttctgca 2161 gcaaatcagg gcttccccct aacatctgaa ctcctgtaaa ccttcatccc tggcccccta 2221 tcttgggccc attagttttg gggatggggc acagggcata gctatgactt tgctttctgg 2281 ttggagcctg gccggaagga agagccctgg aggtggttgg gggcaaatgt gccctgagtc 2341 cttggggtgg ttctgcttat tcttcaagtt tatctgaatc tgtggggagt gcatgatccc 2401 catgttgcaa tatggagtct ctgccctgag atcttcccca tctcagtttt ccttccatga 2461 aagagtacgt gtaaatacat agtgttcata agaaaaaaaa aaaaaaa //