LOCUS BC018302 2181 bp mRNA linear HUM 22-SEP-2005 DEFINITION Homo sapiens TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:17561 IMAGE:3463518), complete cds. ACCESSION BC018302 VERSION BC018302.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2181) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2181) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: h Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..2181 /db_xref="H-InvDB:HIT000038328" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17561 IMAGE:3463518" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2181 /gene="TRMT1" /gene_synonym="FLJ20244" /db_xref="GeneID:55621" CDS 246..2138 /gene="TRMT1" /gene_synonym="FLJ20244" /codon_start=1 /product="TRMT1 protein" /protein_id="AAH18302.1" /db_xref="GeneID:55621" /translation="MQGSSLWLSLTFRSARVLSRARFFEWQSPGLPNTAAMENGTGPY GEERPREVQETTVTEGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFARIQLGAKGI QIKVPGEKDTQKVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGL AASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQPSQADARMLMY QHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSK YGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTGQAK VKASARAKFSAACGPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPGR FHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLS HACKNAVKTDAPASALWDIMRCWEKECPVKRERLSETSPAFRILSVEPRLQANFTIRE DANPSSRQRGLKRFQANPEANWGPRPRARPGGKAADEAMEERRRLLQNKRKEPPEDVA QRAARLKTFPCKRFKEGTCQRGDQCCYSHSPPTPRVSADAAPDCPETSNQTPPGPGAA AGPGID" BASE COUNT 457 a 669 c 665 g 390 t ORIGIN 1 gggctaggca gcgcggggag ggattcggac tcggggcggg cctgcacgag ggcatcggct 61 ccacagggac cagtcatccc caaaacgagg ggatatcagc ttaccgaggc cgcaggtttt 121 cctagtccct acctcataga tatgtaggac atccccgggc ccggaatgcg gctctctgac 181 cctctctgtg ccctcccccg ccccccgaac caggcttggc gggcggaggc gccagcggat 241 gtctcatgca aggatcgtct ctgtggctaa gcctcacttt ccgctccgcc cgggtgctct 301 ctagagcccg gtttttcgag tggcagtctc cagggctgcc gaatacagca gcgatggaga 361 acggcaccgg gccctacgga gaagaacgtc cacgtgaagt ccaggagacg acagtcaccg 421 agggggctgc caaaatcgcc tttcccagtg ccaacgaggt cttttataac ccggtgcagg 481 aattcaatcg ggacctgaca tgtgctgtga tcaccgagtt tgctcgcatt cagcttgggg 541 ccaaaggaat ccagatcaag gttccaggag agaaggacac gcaaaaagtg gtcgtggact 601 tgtcagagca agaggaggaa aaggttgaac tgaaagagag tgaaaacctg gcctcaggag 661 accaacctcg cacagcggcc gtgggggaga tctgtgagga aggcctgcat gtgctggaag 721 gcctggcagc ttcaggccta cgttccattc gatttgccct agaggtgcct gggctcagat 781 ctgtggttgc aaacgatgcc tccacccggg ctgtggatct catacgccgg aatgtccagc 841 tcaatgacgt ggcccacctg gtacagccga gccaagcaga tgcccggatg ctgatgtacc 901 agcaccagag ggtgtcggag aggtttgacg tcatcgatct ggacccctat ggcagcccag 961 ccaccttcct ggatgcagct gtgcaggctg tgagtgaagg agggttgctg tgtgtgacct 1021 gcacagacat ggcggtgttg gcggggaaca gcggggagac gtgctacagc aagtacgggg 1081 ccatggccct caagagccgg gcctgccacg agatggccct gagaatcgtc ctgcacagcc 1141 tggacctccg cgccaactgc taccagcgct tcgtggtgcc gctgctcagc atcagcgctg 1201 acttctacgt gcgtgttttt gtccgtgtct tcaccggcca ggccaaggtc aaggcctcag 1261 ccagggccaa gttctctgca gcctgtggtc cccctgtgac ccccgagtgt gaacactgtg 1321 ggcaacgaca ccagcttggt ggccccatgt gggcagagcc catccatgac ctggattttg 1381 tgggccgtgt cctggaggct gtgagcgcta accccggccg cttccacacc tcggagcgga 1441 tccgaggggt cctgagcgtc atcactgagg agctcccgga cgtgcctctg tactacaccc 1501 tggaccagct gagcagcacc atccactgca acacaccaag cctcctgcag ttgcggtcgg 1561 ccctcctcca cgctgacttc cgggtctcac tctcccacgc ctgtaagaac gctgtgaaga 1621 cggatgcccc tgcctctgcc ctctgggaca tcatgcgttg ctgggagaag gaatgtccgg 1681 tgaaacggga gcgactatca gagactagcc cagcgttccg cattctcagt gtggagccca 1741 ggctgcaggc caacttcacc atccgggaag atgccaaccc cagctcccga cagcgaggac 1801 tcaagcgctt ccaggctaac ccggaggcca actggggtcc ccggcctcgt gcccggccag 1861 ggggcaaggc ggccgacgaa gctatggagg agagacgcag gctgcttcag aacaagcgga 1921 aggagccgcc ggaagatgtg gcccagcggg ctgcccggct caagacattt ccttgcaaga 1981 ggtttaagga gggcacctgt caacgcgggg accagtgctg ctactcccac agccccccga 2041 cacccagggt ttctgctgat gctgcccctg actgtccaga gacctccaac cagacccccc 2101 ctggacctgg ggctgccgct gggccaggca tagactgaac caataaagag atgtcacgtc 2161 accttcaaaa aaaaaaaaaa a //