LOCUS BC018259 2106 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 6, mRNA (cDNA clone MGC:17453 IMAGE:3448510),
complete cds.
ACCESSION BC018259
VERSION BC018259.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2106)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2106)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC018259.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: o Column: 9.
FEATURES Location/Qualifiers
source 1..2106
/db_xref="H-InvDB:HIT000038319"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17453 IMAGE:3448510"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2106
/gene="XRCC6"
/gene_synonym="CTC75"
/gene_synonym="CTCBF"
/gene_synonym="KU70"
/gene_synonym="ML8"
/gene_synonym="TLAA"
/db_xref="GeneID:2547"
/db_xref="HGNC:HGNC:4055"
/db_xref="MIM:152690"
CDS 39..1868
/gene="XRCC6"
/gene_synonym="CTC75"
/gene_synonym="CTCBF"
/gene_synonym="KU70"
/gene_synonym="ML8"
/gene_synonym="TLAA"
/codon_start=1
/product="X-ray repair complementing defective repair in
Chinese hamster cells 6"
/protein_id="AAH18259.1"
/db_xref="GeneID:2547"
/db_xref="HGNC:HGNC:4055"
/db_xref="MIM:152690"
/translation="MSGWESYYKTEGDEEAEEEQEENLEASGDYKYSGRDSLIFLVDA
SKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNI
YVLQELDNPGAKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQFK
MSHKRIMLFTNEDNPHGNDSAKASRARTKAGDLRDTGIFLDLMHLKKPGGFDISLFYR
DIISIAEDEDLRVHFEESSKLEDLLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNL
VQKALKPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQIYGSRQIILEKEET
EELKRFDDPGLMLMGFKPLVLLKKHHYLRPSLFVYPEESLVIGSSTLFSALLIKCLEK
EVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFADDKRKMPFTE
KIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALDLMEPEQAVDLTL
PKVEAMNKRLGSLVDEFKELVYPPDYNPEGKVTKRKHDNEGSGSKRPKVEYSEEELKT
HISKGTLGKFTVPMLKEACRAYGLKSGLKKQELLEALTKHFQD"
BASE COUNT 604 a 460 c 553 g 489 t
ORIGIN
1 ttggtcgctt ccctgcgcca aagtgagcag tagccaacat gtcagggtgg gagtcatatt
61 acaaaaccga gggcgatgaa gaagcagagg aagaacaaga agagaacctt gaagcaagtg
121 gagactataa atattcagga agagatagtt tgattttttt ggttgatgcc tccaaggcta
181 tgtttgaatc tcagagtgaa gatgagttga caccttttga catgagcatc cagtgtatcc
241 aaagtgtgta catcagtaag atcataagca gtgatcgaga tctcttggct gtggtgttct
301 atggtaccga gaaagacaaa aattcagtga attttaaaaa tatttacgtc ttacaggagc
361 tggataatcc aggtgcaaaa cgaattctag agcttgacca gtttaagggg cagcagggac
421 aaaaacgttt ccaagacatg atgggccacg gatctgacta ctcactcagt gaagtgctgt
481 gggtctgtgc caacctcttt agtgatgtcc aattcaagat gagtcataag aggatcatgc
541 tgttcaccaa tgaagacaac ccccatggca atgacagtgc caaagccagc cgggccagga
601 ccaaagccgg tgatctccga gatacaggca tcttccttga cttgatgcac ctgaagaaac
661 ctgggggctt tgacatatcc ttgttctaca gagatatcat cagcatagca gaggatgagg
721 acctcagggt tcactttgag gaatccagca agctagaaga cctgttgcgg aaggttcgcg
781 ccaaggagac caggaagcga gcactcagca ggttaaagct gaagctcaac aaagatatag
841 tgatctctgt gggcatttat aatctggtcc agaaggctct caagcctcct ccaataaagc
901 tctatcggga aacaaatgaa ccagtgaaaa ccaagacccg gacctttaat acaagtacag
961 gcggtttgct tctgcctagc gataccaaga ggtctcagat ctatgggagt cgtcagatta
1021 tactggagaa agaggaaaca gaagagctaa aacggtttga tgatccaggt ttgatgctca
1081 tgggtttcaa gccgttggta ctgctgaaga aacaccatta cctgaggccc tccctgttcg
1141 tgtacccaga ggagtcgctg gtgattggga gctcaaccct gttcagtgct ctgctcatca
1201 agtgtctgga gaaggaggtt gcagcattgt gcagatacac accccgcagg aacatccctc
1261 cttattttgt ggctttggtg ccacaggaag aagagttgga tgaccagaaa attcaggtga
1321 ctcctccagg cttccagctg gtctttttac cctttgctga tgataaaagg aagatgccct
1381 ttactgaaaa aatcatggca actccagagc aggtgggcaa gatgaaggct atcgttgaga
1441 agcttcgctt cacatacaga agtgacagct ttgagaaccc cgtgctgcag cagcacttca
1501 ggaacctgga ggccttggcc ttggatttga tggagccgga acaagcagtg gacctgacat
1561 tgcccaaggt tgaagcaatg aataaaagac tgggctcctt ggtggatgag tttaaggagc
1621 ttgtttaccc accagattac aatcctgaag ggaaagttac caagagaaaa cacgataatg
1681 aaggttctgg aagcaaaagg cccaaggtgg agtattcaga agaggagctg aagacccaca
1741 tcagcaaggg tacgctgggc aagttcactg tgcccatgct gaaagaggcc tgccgggctt
1801 acgggctgaa gagtgggctg aagaagcagg agctgctgga agccctcacc aagcacttcc
1861 aggactgacc agaggccgcg cgtccagctg cccttccgca gtgtggccag gctgcctggc
1921 cttgtcctca gccagttaaa atgtgtttct cctgagctag gaagagtcta cccgacataa
1981 gtcgagggac tttatgtttt tgaggctttc tgttgccatg gtgatggtgt agccctccca
2041 ctttgctgtt ccttacttta ctgcctgaat aaagagccct aagtttgtac taaaaaaaaa
2101 aaaaaa
//