LOCUS BC018135 3524 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens pre-mRNA cleavage factor I, 59 kDa subunit, mRNA (cDNA clone MGC:9315 IMAGE:3913173), complete cds. ACCESSION BC018135 VERSION BC018135.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3524) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3524) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 22 Row: k Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24432015. FEATURES Location/Qualifiers source 1..3524 /db_xref="H-InvDB:HIT000050698" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9315 IMAGE:3913173" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3524 /gene="FLJ12529" /gene_synonym="FLJ39024" /gene_synonym="MGC9315" /db_xref="GeneID:79869" CDS 101..1516 /gene="FLJ12529" /gene_synonym="FLJ39024" /gene_synonym="MGC9315" /codon_start=1 /product="pre-mRNA cleavage factor I, 59 kDa subunit" /protein_id="AAH18135.1" /db_xref="GeneID:79869" /translation="MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDD RSSSTEPPPPVRQEPSPKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVI RSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPA TRQNLSQFEAQARKRECVRVPRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKP PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPH LAVPPPGAIPPALHLNPAFFPPPNATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSE AEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCRVL ISSLKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHDD YFQERNREHERHRDRERDRHH" BASE COUNT 874 a 952 c 837 g 861 t ORIGIN 1 gagtcgcggg ccttttgagg gaggaggcag agcgcgccgg gccggtggca tcttccttac 61 tttgtccatc ctccggactc gcgatcttcc ttccggagcc atgtcagaag gagtggactt 121 gattgatata tatgctgacg aggagttcaa ccaggaccca gagttcaaca atacagatca 181 gattgacctg tatgatgatg tgctgacagc cacctcacag ccctcagatg acagaagcag 241 cagcactgaa ccacctcctc ctgttcgcca ggagccatct cccaagccca acaacaagac 301 ccctgcaatt ctgtatacct acagtggcct gcgtaataga cgagctgccg tttatgtggg 361 cagcttctcc tggtggacca cagaccagca gctgatccag gttattcgct ctataggagt 421 ctatgatgtg gtggagttga aatttgcaga gaatcgagca aatggccagt ccaaagggta 481 tgctgaggtg gtggtagcct ctgaaaactc tgtccacaaa ttgttggaac tcctaccagg 541 gaaagttctt aatggagaaa aagtggacgt gaggccggcc acccggcaga acctgtcaca 601 gtttgaggca caggctcgga aacgtgagtg tgtccgagtc ccaagagggg gaatacctcc 661 acgggcccat tcccgagatt ctagtgattc tgctgatgga cgggccacac cctctgagaa 721 ccttgtaccc tcatctgctc gtgtggataa gccccccagt gtgctgccct acttcaatcg 781 tcctccttcg gcccttcccc tgatgggtct gcccccacca ccaattccac ccccaccacc 841 tctctcctca agctttgggg tccctcctcc tcctcctggt atccactacc agcatctcat 901 gcccccacct cctcgattac ctcctcatct tgctgtacct ccccctgggg ccatcccacc 961 tgcccttcac ctcaatccag ccttcttccc cccaccaaac gctacagtgg ggcctccacc 1021 agatacttac atgaaggcct ctgcccccta taaccaccat ggcagccgag attcgggccc 1081 tccaccctct acagtgagtg aagccgaatt tgaagatatc atgaagcgaa acagagcaat 1141 ttccagcagt gccatttcca aagcagtatc tggagccagt gcaggggatt acagtgacgc 1201 aattgagacg ctgctcacag ccattgcggt tatcaaacag tcccgggttg ccaatgatga 1261 gcgttgccgt gtcctcatct cctctcttaa ggactgtctt catggcattg aagccaagtc 1321 ctacagtgtg ggtgccagtg ggagctcttc caggaaaaga catcgctccc gggaaaggtc 1381 acctagccgg tcccgggaga gcagcaggag gcaccgggat ctgcttcata atgaagatcg 1441 gcatgatgat tatttccaag aaaggaaccg ggagcatgag agacaccggg atagagaacg 1501 ggaccggcac cactgagaaa ggagtctggt tggaagcaaa tgttttttta atggacttgc 1561 atctcctcac cttgatcagg actaaaggac ggaggccgcc ccaccccctt ccctttcctc 1621 caaaccccta actccctcca gacacccagg gaataccctc tgccccacag gattgaagac 1681 tgcttggcag tcctcccaat cccacacctc ctgtttgcca ggggaaagaa cctaaagact 1741 tcgtgtgatt gggaggggtg gcagacagga agaaaacatg tccaggcccc tggtctccat 1801 agagaatggt gctttgtcca agaaaacgta tgagtttctg attctccggg agccgttcaa 1861 tggtgaggtt gatgggaaga cttccttccc aaagaaaata gatcctccat gcaggatcta 1921 ggagagtgac tgggtgtgcc aaaatatgcc cagggtcctg ccctcagcac tagatttaat 1981 ggggccaaga gggtccaaac cccttgctaa cataccactt ctttgtttaa ctcctttacc 2041 tttccagccc tttgaggagg gaccatgaga acagaaatta ccttatgaaa agctacttct 2101 gttcctgctt tccctctcac gtattgacgg tttatttctt tgacctccca gagggctgaa 2161 ctctttcaac tctgcgctgc ccagccttct cagtggactt gcccctccta agcagagaag 2221 gcctatgagg ttgcttgctg ctgggaagcc tggcagagcc aattaccacc ctctgctgct 2281 tagtgcttgg gtacctcttg caataaccag ctcttagttg ttccctttcc ctggggcttt 2341 tccatttaac acatggagcc cttcccccag aaggctactt tcttgtttta gaggaaggta 2401 ctgcccattg ggagatgggg acattgggac ctcagcaatg aagaaccctt gtgaagtaac 2461 caggaggaat ggggaaagaa gcaagttggg caggatatgg cctacttcca taggcttttc 2521 ttttttcagg tttgatgtaa gcatgggctt acatccccca ggtacatact tttacttatt 2581 gtgggataac ctggcactag taggcaggta aagtcacaaa tttggtgtct tttcaccttt 2641 tgactgttga cttaatagct cctctcactc tgcctggaga tacttcctgc ctcagatgag 2701 gagccagaag aaacagagcc cgacttgaat gaactcagct cagagttcta aggaccagca 2761 ttctgggggc cattttctct acaggcaaat ggaattgctt ttccataaca tccaaattgt 2821 aatgtggttg ctgctgaagg aggaggcagc agcgaggtcc tgcggtaccc atggggtgat 2881 gctacttctg catgcatcta cagggcatct gacacctaac atgagacgtg gcatgtgaga 2941 tgagacttgg catgtgagac atagggtcac tagagaccct tctgggtcag aggagagaga 3001 ctgaattgga ctaaacccgt cctctgttcc cagcacgttt ctcatatagc cctcagtcac 3061 tgagggagtc ccccgcagga ttggagaggc acattccctt gggacagagg ctacaggttg 3121 gagctttttt tcccctgtcc cccaacccca tccccacctc cacttcagaa catggcaccc 3181 cacccaactg gccaagtgtt aagtgatgtg cttattgaga gcaactccgg gtgtctttta 3241 aaatgtagag aaaaggtgac agtttaagga aaaatatata tagaatacca gaaatgccgt 3301 ttacccggag aatttttttc tccccatttg ttttgttttt actcaatgac accattttta 3361 gttttatttc ctgatagcaa aaggaaaaaa aacacccatc cctcaaaaag gccaaggtcc 3421 cgtccccctg ttgtcggtga tttgtttgtc tttctgatag gttgaaaatt gtgtaataaa 3481 cttgatgacg ctgtcaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //