LOCUS BC018117 2201 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor protein D52, mRNA (cDNA clone MGC:8975
IMAGE:3916870), complete cds.
ACCESSION BC018117
VERSION BC018117.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70608192.
FEATURES Location/Qualifiers
source 1..2201
/db_xref="H-InvDB:HIT000038275"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8975 IMAGE:3916870"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2201
/gene="TPD52"
/gene_synonym="D52"
/gene_synonym="hD52"
/gene_synonym="N8L"
/gene_synonym="PC-1"
/gene_synonym="PrLZ"
/db_xref="GeneID:7163"
/db_xref="HGNC:HGNC:12005"
/db_xref="MIM:604068"
CDS 88..642
/gene="TPD52"
/gene_synonym="D52"
/gene_synonym="hD52"
/gene_synonym="N8L"
/gene_synonym="PC-1"
/gene_synonym="PrLZ"
/codon_start=1
/product="tumor protein D52"
/protein_id="AAH18117.1"
/db_xref="GeneID:7163"
/db_xref="HGNC:HGNC:12005"
/db_xref="MIM:604068"
/translation="MDRGEQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELA
KVEEEIQTLSQVLAAKEKHLAEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSET
LSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKVENLKSKVGGTKPAGGDFGE
VLNSAANASATTTEPLPEKTQESL"
BASE COUNT 712 a 402 c 421 g 666 t
ORIGIN
1 agctctgcgc ggcgcggcgg gcgatccgag ccgggacggg ctgcaggcgg gggtgctgca
61 gaggacacga ggcggcgggc tggagacatg gaccgcggcg agcaaggtct gctgagaaca
121 gacccagtcc ctgaggaagg agaagatgtt gctgccacga tcagtgccac agagaccctc
181 tcggaagagg agcaggaaga gctaagaaga gaacttgcaa aggtagaaga agaaatccag
241 actctgtctc aagtgttagc agcaaaagag aagcatctag cagagatcaa gcggaaactt
301 ggaatcaatt ctctacagga actaaaacag aacattgcca aagggtggca agacgtgaca
361 gcaacatctg cttacaagaa gacatctgaa accttatccc aggctggaca gaaggcctca
421 gctgcttttt cgtctgttgg ctcagtcatc accaaaaagc tggaagatgt aaaaaactcc
481 ccaactttta aatcatttga agaaaaggtc gaaaacttaa agtctaaagt agggggaacc
541 aagcctgctg gtggtgattt tggagaagtc ttgaattcgg ctgcaaatgc tagtgccacc
601 accacggagc ctcttccaga aaagacacag gagagcctgt gagattccta cctttgttct
661 gctacccact gccagatgct gcaagcgagg tccaagcaca tcttgtcaac atgcattgcc
721 atgaatttct accagatgtg cttttattta gctttacata ttcctttgac caaatagttt
781 gtgggttaaa caaaatgaaa atatcttcac ctctattctt gggaaacacc ctttagtgta
841 catttatgtt cctttattta ggaaacacca ttataaaaac acttatagta aatggggaca
901 ttcactataa tgatctaaga agctacagat tgtcatagtt gttttcctgc tttacaaaat
961 tgctccagat ctggaatgcc agtttgacct ttgtcttcta taatatttcc tttttttccc
1021 ctctttgaat ctctgtatat ttgattctta actaaaattg ttctcttaaa tattctgaat
1081 cctggtaatt aaaagtttgg gtgtattttc tttacctcca aggaaagaac tactagctac
1141 aaaaaatatt ttggaataag cattgttttg gtataaggta catattttgg ttgaagacac
1201 cagactgaag taaacagctg tgcatccaat ttattatagt tttgtaagta acaatatgta
1261 atcaaacttc taggtgactt gagagtggaa cctcctatat cattatttag caccgtttgt
1321 gacagtaacc atttcagtgt attgtttatt ataccactta tatcaactta tttttcacca
1381 ggttaaaatt ttaatttcta caaaataaca ttctgaatca agcacactgt atgttcagta
1441 ggttgaacta tgaacactgt catcaatgtt cagttcaaaa gcctgaaagt ttagatctag
1501 aagctggtaa aaatgacaat atcaatcaca ttaggggaac cattgttgtc ttcacttaat
1561 ccatttagca ctatttaaaa taagcacacc aagttatatg actaatataa cttgaaaatt
1621 ttttatactg aggggttggt gataactctt gaggatgtaa tgcattaata aaaatcaact
1681 catcattttc tacttgtttt caatgtgttg gaaactgtaa aatgatactg tagaacctgt
1741 ctcctacttt gaaaactgaa tgtcagggct gagtgaatca aagtgtctag acatatttgc
1801 atagaggcca aggtattcta ttctaataac tgcttactca acactaccac cttttcctta
1861 tactgtatat gattatggcc tacaatgttg tatttgttat ttattaaatt gtgattgttt
1921 tattattgtt tatgccaaat gttaactgcc aagcttggag tgacctaaag cattttttaa
1981 aagcatggct agatttactt cagtataaat tatcttatga aaaccaaatt ttaaaagcca
2041 caggtgttga ttgttataaa ataacatgct gccattcttg attgctagag tttttgttag
2101 tactttggat gcaattaaaa ctatgtgcta tcacatgtga aaagcttaat aaattccatc
2161 tatcagtaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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