LOCUS BC018098 1196 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens putative homeodomain transcription factor 2, mRNA
(cDNA clone IMAGE:4795411), partial cds.
ACCESSION BC018098
VERSION BC018098.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1196)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1196)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: e Column: 4.
FEATURES Location/Qualifiers
source 1..1196
/db_xref="H-InvDB:HIT000089572"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4795411"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..1196
/gene="PHTF2"
/gene_synonym="DKFZP564F013"
/db_xref="GeneID:57157"
CDS <1..1039
/gene="PHTF2"
/gene_synonym="DKFZP564F013"
/codon_start=2
/product="PHTF2 protein"
/protein_id="AAH18098.1"
/db_xref="GeneID:57157"
/translation="STGGKRRRKLRKAAHLEVHREGDGSSTTGNTQEGAVQNHGTSTS
HSVGTVFRDLWHAAFFLSGSKKAKNSIDKSTETDNGYVSLDGKKTVKSGEDGIQNHEP
QCETIRPEETAWNTGTLRNGPSKDTQRTITNVSDEVSSEEGPETGYSLRRHVDRTSEG
VLRNRKSHHYKKHYPNEDAPKSGTSCSSRCSSSRQDSESARPESETEDVLWEDLLHCA
ECHSSCTSETDVENHQINPCVKKEYRDDPFHQVNSHIPGIGYQIFGNAVSLILGLTPF
VFRLSQATDLEQLTAHSASELYVIAFGSNEDVIVLSMVIISFVVRVSLVWIFFFLLCV
AERTYKQVGIM"
BASE COUNT 399 a 211 c 245 g 341 t
ORIGIN
1 aagtacaggg ggtaaaagaa gaaggaaatt aagaaaagca gcccatttgg aagtacatag
61 ggaaggagat ggttctagta ccacaggtaa cacacaagag ggagcagttc agaaccacgg
121 tacaagcacc tctcacagcg ttggcactgt cttcagagat ctctggcatg ctgctttctt
181 tttatcagga tcaaagaaag caaagaattc aattgataaa tcaactgaaa ctgacaatgg
241 ctatgtatcc cttgatggga agaagactgt taaaagcggt gaagatggaa tacaaaacca
301 tgaacctcag tgtgaaacta ttcgaccaga agagacagcc tggaacacag gaacactgag
361 gaatggtcct agcaaagata cccaaaggac aataacaaat gtctctgatg aagtctccag
421 tgaggaaggt cctgaaacag gatactcatt acgtcgtcat gtggacagga cttctgaagg
481 tgttcttcgg aatagaaagt cacaccatta taagaaacat taccctaatg aggacgcccc
541 taaatcgggt actagttgca gctctcgctg ttcaagttcc agacaggatt ctgagagtgc
601 aaggccagaa tctgaaacag aagatgtgtt atgggaagac ttgttacatt gtgcagaatg
661 ccattcatct tgtaccagtg agacagatgt ggaaaatcat cagattaatc catgtgtgaa
721 aaaagaatat agagatgacc cttttcatca ggtgaacagc catataccag gaataggata
781 ccagattttt ggaaatgcag tctctctcat actgggttta actccatttg ttttccgact
841 ttctcaagct acagacttgg aacaactcac agcacattct gcttcagaac tttatgtgat
901 tgcatttggt tctaatgaag atgtcatagt tctttctatg gttataataa gttttgtggt
961 tcgcgtgtct cttgtgtgga ttttcttttt tttgctctgt gtagcagaaa gaacttataa
1021 acaggtgggt ataatgtaga cttccgaata agaatatttt atcgttttca taatattaaa
1081 agtattcctg aagtacttta ttatttcatt atatcatttt tacctaatta ttttttattt
1141 tgcttttata gtacctaacc aaataaaatc ttaacaattc aaaaaaaaaa aaaaaa
//