LOCUS BC018082 1068 bp mRNA linear HUM 12-JUN-2008
DEFINITION Homo sapiens transmembrane protein 170A, mRNA (cDNA clone MGC:26939
IMAGE:4796761), complete cds.
ACCESSION BC018082
VERSION BC018082.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1068)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1068)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21687071.
FEATURES Location/Qualifiers
source 1..1068
/db_xref="H-InvDB:HIT000038257"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26939 IMAGE:4796761"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1068
/gene="TMEM170A"
/db_xref="GeneID:124491"
/db_xref="HGNC:HGNC:29577"
CDS 87..521
/gene="TMEM170A"
/codon_start=1
/product="transmembrane protein 170A"
/protein_id="AAH18082.1"
/db_xref="GeneID:124491"
/db_xref="HGNC:HGNC:29577"
/translation="MEREGSGGSGGSAGLLQQILSLKVVPRVGNGTLCPNSTSLCSFP
EMWYGVFLWALVSSLFFHVPAGLLALFTLRHHKYGRFMSVSILLMGIVGPITAGILTS
AAIAGVYRAAGKEMIPFEALTLGTGQTFCVLVVSFLRILATL"
BASE COUNT 268 a 222 c 257 g 321 t
ORIGIN
1 gctgaggcgg cgagggtgag tcggcgccgg ccgctaccgc acttcgggcg ctcgtccctc
61 atttctctgt ggtgaatggc gacgggatgg agcgcgaggg gagcggcggc agcggcgggt
121 cggccgggct cctgcagcag atcctgagcc tgaaggttgt gccgcgggtg ggcaacggga
181 ccctgtgccc caactctact tccctctgct ccttcccaga gatgtggtat ggtgtattcc
241 tgtgggcact ggtgtcttct ctcttctttc atgtccctgc tggattactg gccctcttca
301 ccctcagaca tcacaaatat ggtaggttca tgtctgtaag catcctgttg atgggcatcg
361 tgggaccaat tactgctgga atcttgacaa gtgcagctat tgctggagtt taccgagcag
421 cagggaagga aatgatacca tttgaagccc tcacactggg cactggacag acattttgcg
481 tcttggtggt ctccttttta cggattttag ctactctata gcatacatcc ttatgctgag
541 atgttgaact taaactttat ggaatcctcc aaaagaatac attatggagt gtagtgtttt
601 cttagttctt caaagggaag caacttggat gaacaggaac atgaaggaca acacatctca
661 gccttttctt cattttgaag ctcctagaat tgaagactta tgtggactcc tattgttctc
721 aaccaaaaca agtcttttgg ctttcttttt tgtagatatt taatttaagc agttttaatg
781 tgtaccttta cccaagccaa gtcaacagtg tctctggggt ggcatccttt gcactgaaat
841 ttacagtatt ctgtgagatg tcgcatattt tgaagaaacc gtggaagata ctggtttatt
901 tcaaatgagc agagtatgtt gtattaaaat cttatctaat cttgattaaa atttggcaaa
961 ctcttttctt tgctacatct tagtgacaat aaatgccaaa taggttttgg ttgagtatag
1021 ttttgaaaac aaatttggtg aaataaagca ggaaaaaaaa aaaaaaaa
//