LOCUS BC018051 1817 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium channel, subfamily K, member 1, mRNA (cDNA
clone MGC:26384 IMAGE:4817185), complete cds.
ACCESSION BC018051
VERSION BC018051.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1817)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1817)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 32 Row: n Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15451900.
FEATURES Location/Qualifiers
source 1..1817
/db_xref="H-InvDB:HIT000038240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26384 IMAGE:4817185"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1817
/gene="KCNK1"
/gene_synonym="DPK"
/gene_synonym="HOHO"
/gene_synonym="TWIK-1"
/gene_synonym="TWIK1"
/db_xref="GeneID:3775"
/db_xref="HGNC:HGNC:6272"
/db_xref="MIM:601745"
CDS 46..1056
/gene="KCNK1"
/gene_synonym="DPK"
/gene_synonym="HOHO"
/gene_synonym="TWIK-1"
/gene_synonym="TWIK1"
/codon_start=1
/product="potassium channel, subfamily K, member 1"
/protein_id="AAH18051.1"
/db_xref="GeneID:3775"
/db_xref="HGNC:HGNC:6272"
/db_xref="MIM:601745"
/translation="MLQSLAGSSCVRLVERHRSAWCFGFLVLGYLLYLVFGAVVFSSV
ELPYEDLLRQELRKLKRRFLEEHECLSEQQLEQFLGRVLEASNYGVSVLSNASGNWNW
DFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITVHV
TRRPVLYFHIRWGFSKQVVAIVHAVLLGFVTVSCFFFIPAAVFSVLEDDWNFLESFYF
CFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHELKKF
RKMFYVKKDKDEDQVHIIEHDQLSFSSITDQAAGMKEDQKQNEPFVATQSSACVDGPA
NH"
BASE COUNT 469 a 404 c 440 g 504 t
ORIGIN
1 gcggcgttgg ccttggcttt ggctttggcg gcggcggtgg agaagatgct gcagtccctg
61 gccggcagct cgtgcgtgcg cctggtggag cggcaccgct cggcctggtg cttcggcttc
121 ctggtgctgg gctacttgct ctacctggtc ttcggcgcag tggtcttctc ctcggtggag
181 ctgccctatg aggacctgct gcgccaggag ctgcgcaagc tgaagcgacg cttcttggag
241 gagcacgagt gcctgtctga gcagcagctg gagcagttcc tgggccgggt gctggaggcc
301 agcaactacg gcgtgtcggt gctcagcaac gcctcgggca actggaactg ggacttcacc
361 tccgcgctct tcttcgccag caccgtgctc tccaccacag gttatggcca caccgtgccc
421 ttgtcagatg gaggtaaggc cttctgcatc atctactccg tcattggcat tcccttcacc
481 ctcctgttcc tgacggctgt ggtccagcgc atcaccgtgc acgtcacccg caggccggtc
541 ctctacttcc acatccgctg gggcttctcc aagcaggtgg tggccatcgt ccatgccgtg
601 ctccttgggt ttgtcactgt gtcctgcttc ttcttcatcc cggccgctgt cttctcagtc
661 ctggaggatg actggaactt cctggaatcc ttttattttt gttttatttc cctgagcacc
721 attggcctgg gggattatgt gcctggggaa ggctacaatc aaaaattcag agagctctat
781 aagattggga tcacgtgtta cctgctactt ggccttattg ccatgttggt agttctggaa
841 accttctgtg aactccatga gctgaaaaaa ttcagaaaaa tgttctatgt gaagaaggac
901 aaggacgagg atcaggtgca catcatagag catgaccaac tgtcattctc ctcgatcaca
961 gaccaggcag ctggcatgaa agaggaccag aagcaaaatg agccttttgt ggccacccag
1021 tcatctgcct gcgtggatgg ccctgcaaac cattgagcgt aggatttgtt gcattatgct
1081 agagcaccag ggtcagggtg caaggaagag gcttaagtat gttcattttt atcagaatgc
1141 aaaagcgaaa attatgtcac tttaagaaat agctactgtt tgcaatgtct tattaaaaaa
1201 caacaaaaaa agacaaatgg aacaaagaag ctgtgacccc agcaggatgt ctaatatgtg
1261 aggaaatgag atgtccacct aaaattcata tgtgacaaaa ttatctcgac cttacatagg
1321 aggagaatac ttgaagcagt atgctgctgt ggttagaagc agattttata cttttaactg
1381 gaaactttgg ggtttgcatt tagatcattt agctgatggc taaatagcaa aatttatatt
1441 tagaagcaaa aaaaaaaagc atagagatgt gttttataaa taggtttatg tgtactggtt
1501 tgcatgtacc cacccaaaat gattattttt gtagaatcta agttaaactt actatttata
1561 atgcataggt aaccattaac tatgtacata taaagtataa atatgtttat attctgtaca
1621 tatggtttag gtcaccagat cctagtgtag ttctgaaact aagactatag atattttgtt
1681 tcttttgatt tctctttata ctaaagaatc cagagttgct acaataaaat aaggggaata
1741 ataaacttga gagtgaataa ccatagtatt ctgctgcaat aaatgtttct accctcttgc
1801 gaaaaaaaaa aaaaaaa
//