LOCUS BC017955 1689 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens deiodinase, iodothyronine, type I, mRNA (cDNA clone
MGC:24074 IMAGE:4607072), complete cds.
ACCESSION BC017955
VERSION BC017955.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1689)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1689)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55749949.
FEATURES Location/Qualifiers
source 1..1689
/db_xref="H-InvDB:HIT000038207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:24074 IMAGE:4607072"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1689
/gene="DIO1"
/gene_synonym="5DI"
/db_xref="GeneID:1733"
/db_xref="HGNC:HGNC:2883"
/db_xref="MIM:147892"
CDS 24..509
/gene="DIO1"
/gene_synonym="5DI"
/codon_start=1
/transl_except=(pos:399..401,aa:Sec)
/product="deiodinase, iodothyronine, type I"
/protein_id="AAH17955.2"
/db_xref="GeneID:1733"
/db_xref="HGNC:HGNC:2883"
/db_xref="MIM:147892"
/translation="MGLPQPGLWLKRLWVLLEVAVHVVVGKVLLILFPDRVKRNILAM
GEKTGMTRNPHFSHDNWIPTFFSTQYFWFVLKVRWQRLEDTTELGGLAPNCPVVRLSG
QRCNIWEFMQGNRPLVLNFGSCTUPSFMFKFDQFKRLIEDFSSIADFLVIYIEEAHAS
G"
BASE COUNT 485 a 367 c 375 g 462 t
ORIGIN
1 gagcttactc tggctttgcc gagatggggc tgccccagcc agggctgtgg ctgaagaggc
61 tctgggtgct cttggaggtg gctgtgcatg tggtcgtggg taaagtgctt ctgatattgt
121 ttccagacag agtcaagcgg aacatcctgg ccatgggcga gaagacgggt atgaccagga
181 acccccattt cagccacgac aactggatac caaccttttt cagcacccag tatttctggt
241 tcgtcttgaa ggtccgttgg cagcgactag aggacacgac tgagctaggg ggtctggccc
301 caaactgccc ggtggtccgc ctctcaggac agaggtgcaa catttgggag tttatgcaag
361 gtaataggcc actggtgctg aattttggaa gttgtacctg accttcattt atgttcaaat
421 ttgaccagtt caagaggctt attgaagact ttagttccat agcagatttt cttgtcattt
481 acattgaaga agcacatgca tcagggtaaa tctggccctt ggaactacaa cccagaggaa
541 gttcgtgctg ttctggaaaa gctccacagt taatctggac agatacctca attctaggtg
601 accaacggga gggcttctca aggcttagct ctccctgaga cccagctggc ttttaccctt
661 gacctgtgtc cctagctgaa tcactagctc agatttttct gatctaagca aacaactccc
721 agctgaggaa tgcaggccac agcacccaat caagacaaat tgttattatc agaaaatgaa
781 gcaacacttg agctgttcag gccagttccc tgttgaagaa acagttccct gttgaagaaa
841 gtagagcctg acactgctcc cactttggag accacattcc ctgcacacgg tctttgagag
901 agcagttgca ctctacaggc acacttctga ggtacggtat ctctctccag ccactctgat
961 accaagtaat tcaagctggc attccttcta ttagggaaat tcattttacc caatttgcat
1021 ttatggaatt gatcatttaa gacactaaat tagtttttag aaccaattat gggaagaatt
1081 ccagttgtta ggaagagatg aggagttgga agaggaggga ttagaaacag gaggaggcag
1141 tcatcctctc cttgccaaaa gatttaaacc tgtccacatt ggtggtgatg atgggtgagt
1201 ttccatggta acacatccct aattttacca gggaagagga gagtactcac tttaccatct
1261 ttgaatatat ttcatagaaa tctagctctc tgtaccctga aatcttccac tagcctcact
1321 tttcaacaga gtcatctaga agggagggtt ggcttcccaa aagcataacc ttgaccaaac
1381 caaacaatag gcaccagcaa tgctgtcatt cagttatgca gaagctcatt tgtgaaattc
1441 tgtttctctg atttcttcgc aagtctctta atggtcattt gtgttagatt acatcaaact
1501 gatggatagc cattggtatt catctatttt aactctgtgt ctttacatat ttgtttatga
1561 tggccacagc ctaaagtaca cacggctgtg acttgattca aaagaaaatg ttataagatg
1621 cagtaaacta ataacagaat tattaaaata tatcaggcca aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaa
//