LOCUS BC017867 1564 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens shugoshin-like 1 (S. pombe), mRNA (cDNA clone
MGC:22640 IMAGE:4685140), complete cds.
ACCESSION BC017867
VERSION BC017867.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1564)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1564)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: j Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 60302878.
FEATURES Location/Qualifiers
source 1..1564
/db_xref="H-InvDB:HIT000038169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22640 IMAGE:4685140"
/tissue_type="Lung, mucoepidermoid carcinoma"
/clone_lib="NIH_MGC_59"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1564
/gene="SGOL1"
/gene_synonym="NY-BR-85"
/gene_synonym="Sgo1"
/db_xref="GeneID:151648"
/db_xref="HGNC:HGNC:25088"
/db_xref="MIM:609168"
CDS 141..1019
/gene="SGOL1"
/gene_synonym="NY-BR-85"
/gene_synonym="Sgo1"
/codon_start=1
/product="shugoshin-like 1 (S. pombe)"
/protein_id="AAH17867.1"
/db_xref="GeneID:151648"
/db_xref="HGNC:HGNC:25088"
/db_xref="MIM:609168"
/translation="MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPC
QIITNTSTLLKNYQDNNKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGK
LTSQQTVEPAQNQEICSSGMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEAT
PPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEP
TLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSR
FPDCRKCKLETHICLR"
BASE COUNT 515 a 307 c 311 g 431 t
ORIGIN
1 agttccaggc gacggcggac ggtggtacgg tcctggaggg cccagtgcgc ggggctagcc
61 gtggctggag agcttcgaag agccttgaaa tgtgaggagg aggaagatag ctgttgcaga
121 agtagtggcc aaggcaaagg atggccaagg aaagatgcct gaaaaagtcc tttcaagata
181 gtcttgaaga cataaagaag cgaatgaaag agaaaaggaa taaaaacttg gcagagattg
241 gcaaacgcag gtcttttata gctgcaccat gccaaataat caccaacact tctacactgc
301 tgaaaaatta ccaagacaac aacaaaatgt tagttttagc tttggaaaat gaaaaatcca
361 aagtgaaaga agcccaagat atcatcctac agctgagaaa agaatgttac tatctcacat
421 gtcagctata tgcattgaaa ggaaaactta catcacaaca aacagtagaa cctgctcaga
481 accaggaaat atgttcctct ggaatggacc ccaatagtga tgacagctcc agaaatttat
541 ttgtgaagga tttaccgcaa attcctcttg aagaaactga acttccagga caaggagaat
601 catttcaaat agaagctaca ccacctgaaa ctcagcagtc acctcatctt agcctgaagg
661 atatcaccaa tgtctccttg tatcctgttg tgaaaatcag aagactttct ctttctccaa
721 aaaagaataa agcaagccca gcagtggctc tgcctaaacg taggtgcaca gccagcgtga
781 actataagga gcccaccctc gcttcgaaac tgagaagagg ggaccctttt acagatttgt
841 gttttttgaa ttctcctatt ttcaagcaga aaaaggattt gagacgttct aaaaaaagag
901 ccctggaggt atcacctgcc aaagaagcaa tttttatttt atattatgtt cgagaatttg
961 tttcgagatt cccagactgt aggaaatgta aacttgaaac ccacatctgc ttgaggtaaa
1021 gtccacgggc ttcacatcct tagaaaactt ttttagtcca tgcattcact aatgtatgca
1081 gacctttaat agattctagc tttatgtgtt gggggagaga tggaggggtg ttgacagtct
1141 gtttcactca gcctacatac ataataaaat ctaagccctt taattagaga tagcaacttt
1201 cccagggtga ccgaggaatc agtacgtgtt gaacccctct tttaagtttc cttttggttg
1261 tgtcacttgg agattgcctt ttctttcttg taagctcagc tgtgtcctca aatatattgc
1321 attttaccca gcatttccag gtgttttcag gggtcaaagt ttttaagtta tcttagtctt
1381 tgatattgtg taagcgaaat tctccaatcc catctcctag atgatttttt tttaaatcac
1441 aaaatgtgat tatgcttaac agctgtttcc tgtttctctt aaaataaaat ccatttccta
1501 tttctcttaa aataaaatcc attattctta aaacaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaa
//