LOCUS BC017842 1389 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens napsin A aspartic peptidase, mRNA (cDNA clone
MGC:22526 IMAGE:4693995), complete cds.
ACCESSION BC017842
VERSION BC017842.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1389)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1389)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: n Column: 21.
FEATURES Location/Qualifiers
source 1..1389
/db_xref="H-InvDB:HIT000038161"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22526 IMAGE:4693995"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1389
/gene="NAPSA"
/gene_synonym="KAP"
/gene_synonym="Kdap"
/gene_synonym="NAP1"
/gene_synonym="NAPA"
/gene_synonym="SNAPA"
/db_xref="GeneID:9476"
/db_xref="HGNC:HGNC:13395"
/db_xref="MIM:605631"
CDS 20..1282
/gene="NAPSA"
/gene_synonym="KAP"
/gene_synonym="Kdap"
/gene_synonym="NAP1"
/gene_synonym="NAPA"
/gene_synonym="SNAPA"
/codon_start=1
/product="napsin A aspartic peptidase"
/protein_id="AAH17842.1"
/db_xref="GeneID:9476"
/db_xref="HGNC:HGNC:13395"
/db_xref="MIM:605631"
/translation="MSPPPLLQPLLLLLPLLNVEPSGATLIRIPLHRVQPGRRTLNLL
RGWREPAELPKLGAPSPGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNL
WVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGI
KGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFS
FYLNRDPEEPDGGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHMERVKVGPGLTLCAK
GCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGVW
FNLTAHDYVIQTTRNGVRLCLSGFQALDVPPPAGPFWILGDVFLGTYVAVFDRGDMKS
SARVGLARARTRGADLGWGETAQAQFPG"
BASE COUNT 275 a 416 c 396 g 302 t
ORIGIN
1 gacacccagg tccccagcga tgtctccacc accgctgctg caacccctgc tgctgctgct
61 gcctctgctg aatgtggagc cttccggggc cacactgatc cgcatccctc ttcatcgagt
121 ccaacctgga cgcaggaccc tgaacctact gaggggatgg agagaaccag cagagctccc
181 caagttgggg gccccatccc ctggggacaa gcccatcttc gtacctctct cgaactacag
241 ggatgtgcag tattttgggg aaattgggct gggaacgcct ccacaaaact tcactgttgc
301 ctttgacact ggctcctcca atctctgggt cccgtccagg agatgccact tcttcagtgt
361 gccctgctgg ttacaccacc gatttgatcc caaagcctct agctccttcc aggccaatgg
421 gaccaagttt gccattcaat atggaactgg gcgggtagat ggaatcctga gcgaggacaa
481 gctgactatt ggtggaatca agggtgcatc agtgattttc ggggaggctc tctgggagcc
541 cagcctggtc ttcgcttttg cccattttga tgggatattg ggcctcggtt ttcccattct
601 gtctgtggaa ggagttcggc ccccgatgga tgtactggtg gagcaggggc tattggataa
661 gcctgtcttc tccttttacc tcaacaggga ccctgaagag cctgatggag gagagctggt
721 cctggggggc tcggacccgg cacactacat cccacccctc accttcgtgc cagtcacggt
781 ccccgcctac tggcagatcc acatggagcg tgtgaaggtg ggcccagggc tgactctctg
841 tgccaagggc tgtgctgcca tcctggatac gggcacgtcc ctcatcacag gacccactga
901 ggagatccgg gccctgcatg cagccattgg gggaatcccc ttgctggctg gggagtacat
961 catcctgtgc tcggaaatcc caaagctccc cgcagtctcc ttccttcttg ggggggtctg
1021 gtttaacctc acggcccatg attacgtcat ccagactact cgaaatggcg tccgcctctg
1081 cttgtccggt ttccaggccc tggatgtccc tccgcctgca gggcccttct ggatcctcgg
1141 tgacgtcttc ttggggacgt atgtggccgt cttcgaccgc ggggacatga agagcagcgc
1201 ccgggtgggc ctggcgcgcg ctcgcactcg cggagcggac ctcggatggg gagagactgc
1261 gcaggcgcag ttccccgggt gacgcccaag tgaagcgcat gcgcagcggg tggtcgcgga
1321 ggtcctgcta cccagtaaaa atccactatt tccattggaa aaaaaaaaaa aaaaaaaaaa
1381 aaaaaaaaa
//