LOCUS BC017824 1201 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens lipoma HMGIC fusion partner, mRNA (cDNA clone
MGC:22429 IMAGE:4696562), complete cds.
ACCESSION BC017824
VERSION BC017824.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1201)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1201)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031864.
FEATURES Location/Qualifiers
source 1..1201
/db_xref="H-InvDB:HIT000038151"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22429 IMAGE:4696562"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1201
/gene="LHFP"
/db_xref="GeneID:10186"
/db_xref="HGNC:HGNC:6586"
/db_xref="MIM:606710"
CDS 360..962
/gene="LHFP"
/codon_start=1
/product="lipoma HMGIC fusion partner"
/protein_id="AAH17824.1"
/db_xref="GeneID:10186"
/db_xref="HGNC:HGNC:6586"
/db_xref="MIM:606710"
/translation="MASSLTCTGVIWALLSFLCAATSCVGFFMPYWLWGSQLGKPVSF
GTFRRCSYPVHDESRQMMVMVEECGRYASFQGIPSAEWRICTIVTGLGCGLLLLVALT
ALMGCCVSDLISRTVGRVAGGIQFLGGLLIGAGCALYPLGWDSEEVRQTCGYTSGQFD
LGKCEIGWAYYCTGAGATAAMLLCTWLACFSGKKQKHYPY"
BASE COUNT 282 a 285 c 356 g 278 t
ORIGIN
1 accctccgcc tcctgccaac ccctgctctt ccaggtcggg ccccggggtt ctgcggctgt
61 tagggacaga ggcaaagaag ggcaggacgg tccggtttcc cgtggatgtt cccgcccgag
121 aaagacagca agttgtgtgt gcgcccggga cgcgggaggg aaggtagccg ccgcccgcca
181 gccatggacc atcatcttta gtgcagagga tggaaagttg atgcccagta agactgaaga
241 tccattctgc attacggaac tgtggattat ctgtgggtcc ctggtgattt cacaccttca
301 ttcactcctg cagtccctga acacttactt ggggtcctca ttgccctatc tggtgaaaga
361 tggcatccag cctgacttgt actggagtaa tctgggcttt gctgtctttt ctttgtgctg
421 ccacctcctg cgtggggttc tttatgcctt actggctctg gggatcacag ctgggcaagc
481 ctgtgtcctt cggtaccttc cggaggtgct catatcctgt gcatgatgag agtcggcaga
541 tgatggtgat ggtggaggaa tgtgggcgct atgcctcctt ccagggcatc cccagcgcag
601 aatggaggat ctgcaccata gtgaccggcc tgggttgtgg cctcctcctc ctggtggcgc
661 tcactgccct catgggttgc tgtgtttccg acctcatctc caggacagtg ggaagagtgg
721 ctggaggaat tcagtttctt gggggcttgt tgattggtgc tggctgtgcc ctctacccct
781 tgggctggga cagtgaggaa gtccggcaga cttgtggcta cacttctggc cagtttgacc
841 tggggaagtg tgaaatcggc tgggcctact actgcacggg agcaggtgcc actgccgcca
901 tgctgctgtg cacgtggctg gcttgctttt cgggcaagaa acagaagcac tacccatact
961 gagatggagc taccaagagc agacagagga gaagatgggc caaaggggct tggagaggtc
1021 aaaacatcca cctaccttca aaaggtggga tagtagttct aatccaatac aatgctaata
1081 aaatgaaacc cgataaaatc aggaacatga tataggaagg aaggattgta ggagatttgt
1141 ggggaaaaaa aaaggagagt atagaatgat ggaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 a
//