LOCUS BC017817 1238 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Duffy blood group, chemokine receptor, mRNA (cDNA
clone MGC:22402 IMAGE:4696425), complete cds.
ACCESSION BC017817
VERSION BC017817.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 36 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42822886.
FEATURES Location/Qualifiers
source 1..1238
/db_xref="H-InvDB:HIT000038148"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22402 IMAGE:4696425"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1238
/gene="DARC"
/gene_synonym="CCBP1"
/gene_synonym="CD234"
/gene_synonym="Dfy"
/gene_synonym="GPD"
/db_xref="GeneID:2532"
/db_xref="HGNC:HGNC:4035"
/db_xref="MIM:110700"
CDS 153..1163
/gene="DARC"
/gene_synonym="CCBP1"
/gene_synonym="CD234"
/gene_synonym="Dfy"
/gene_synonym="GPD"
/codon_start=1
/product="Duffy blood group, chemokine receptor"
/protein_id="AAH17817.1"
/db_xref="GeneID:2532"
/db_xref="HGNC:HGNC:4035"
/db_xref="MIM:110700"
/translation="MGNCLHRAELSPSTENSSQLDFEDVWNSSYGVNDSFPDGDYGAN
LEAAAPCHSCNLLDDSALPFFILTSVLGILASSTVLFMLFRPLFRWQLCPGWPVLAQL
AVGSALFSIVVPVLAPGLGSTRSSALCSLGYCVWYGSAFAQALLLGCHASLGHRLGAG
QVPGLTLGLTVGIWGVAALLTLPVTLASGASGGLCTLIYSTELKALQATHTVACLAIF
VLLPLGLFGAKGLKKALGMGPGPWMNILWAWFIFWWPHGVVLGLDFLVRSKLLLLSTC
LAQQALDLLLNLAEALAILHCVATPLLLALFCHQATRTLLPSLPLPEGWFSHLDTLGS
KS"
BASE COUNT 218 a 373 c 331 g 316 t
ORIGIN
1 gcaggcagtg ggcgtggggt aaggcttcct gatgccccct gtccctgccc agaacctgat
61 ggccctcatt agtccttggc tcttatcttg gaagcacagg cgctgacagc cgtcccagcc
121 cttctgtctg cgggcctgaa ccaaacggtg ccatggggaa ctgtctgcac agggcggagc
181 tctccccctc aactgagaac tcaagtcagc tggacttcga agatgtatgg aattcttcct
241 atggtgtgaa tgattccttc ccagatggag actatggtgc caacctggaa gcagctgccc
301 cctgccactc ctgtaacctg ctggatgact ctgcactgcc cttcttcatc ctcaccagtg
361 tcctgggtat cctagctagc agcactgtcc tcttcatgct tttcagacct ctcttccgct
421 ggcagctctg ccctggctgg cctgtcctgg cacagctggc tgtgggcagt gccctcttca
481 gcattgtggt gcccgtcttg gccccagggc taggtagcac tcgcagctct gccctgtgta
541 gcctgggcta ctgtgtctgg tatggctcag cctttgccca ggctttgctg ctagggtgcc
601 atgcctccct gggccacaga ctgggtgcag gccaggtccc aggcctcacc ctggggctca
661 ctgtgggaat ttggggagtg gctgccctac tgacactgcc tgtcaccctg gccagtggtg
721 cttctggtgg actctgcacc ctgatataca gcacggagct gaaggctttg caggccacac
781 acactgtagc ctgtcttgcc atctttgtct tgttgccatt gggtttgttt ggagccaagg
841 ggctgaagaa ggcattgggt atggggccag gcccctggat gaacatcctg tgggcctggt
901 ttattttctg gtggcctcat ggggtggttc taggactgga tttcctggtg aggtccaagc
961 tgttgctgtt gtcaacatgt ctggcccagc aggctctgga cctgctgctg aacctggcag
1021 aagccctggc aattttgcac tgtgtggcta cgcccctgct cctcgcccta ttctgccacc
1081 aggccacccg caccctcttg ccctctctgc ccctccctga aggatggttt tctcatctgg
1141 acacccttgg aagcaaatcc tagttctctt cccacctgtc aacctgaatt aaagtctaca
1201 ctgcctttgt gataaaaaaa aaaaaaaaaa aaaaaaaa
//