LOCUS BC017732 3019 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spermatid perinuclear RNA binding protein, mRNA (cDNA
clone MGC:21529 IMAGE:3914088), complete cds.
ACCESSION BC017732
VERSION BC017732.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3019)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3019)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: m Column: 8.
FEATURES Location/Qualifiers
source 1..3019
/db_xref="H-InvDB:HIT000038111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21529 IMAGE:3914088"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3019
/gene="STRBP"
/gene_synonym="DKFZp434N214"
/gene_synonym="FLJ11307"
/gene_synonym="FLJ14223"
/gene_synonym="FLJ14984"
/gene_synonym="MGC21529"
/gene_synonym="MGC3405"
/gene_synonym="SPNR"
/db_xref="GeneID:55342"
/db_xref="HGNC:HGNC:16462"
CDS 431..2449
/gene="STRBP"
/gene_synonym="DKFZp434N214"
/gene_synonym="FLJ11307"
/gene_synonym="FLJ14223"
/gene_synonym="FLJ14984"
/gene_synonym="MGC21529"
/gene_synonym="MGC3405"
/gene_synonym="SPNR"
/codon_start=1
/product="spermatid perinuclear RNA binding protein"
/protein_id="AAH17732.1"
/db_xref="GeneID:55342"
/db_xref="HGNC:HGNC:16462"
/translation="MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKH
VSDWLDETNKGTKTEGETEVKKDEAGENYSKDQGGRTLCGVMRIGLVAKGLLIKDDMD
LELVLMCKDKPTETLLNTVKDNLPIQIQKLTEEKYQVEQCVNEASIIIRNTKEPTLTL
KVILTSPLIRDELEKKDGENVSMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSC
VIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVMECLASGIL
LPGGPGLHDPCERDPTDALSYMTIQQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSS
KPFQKYSWSVTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRNLRKILDSKAIDLMNAL
MRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQA
MGYPTGFDADIECMSSDEKSDNESKNETVSSNSSNNTGNSTTETSSTLEVRTQGPILT
ASGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASA
ALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAVSAAVQAVRGRGRGTLTRGAFVGAT
AAPGYIAPGYGTPYGYSTAAPAYGLPKRMVLLPVMKFPTYPVPHYSFF"
BASE COUNT 955 a 590 c 721 g 753 t
ORIGIN
1 gcgccaccag ggcagcagcc gccgcagccg ccgccgctgg gcagaggagc cggagacgcg
61 agcgggcgag gtggcggcgg cggcggagcg ggagcgggta ccgggcgcgg gcagagcgcg
121 gcggcgcgga gacggggttt tgccatgttg acctggctgg tctcgaactc ctgaacgcaa
181 gtgatccgcc tgcctcagcc tcccaaggtg ctgggattac aggcacgagc cactgtgcct
241 ggcctcaact gttgcttctt ataaaggtgt gttccagaga acaagccttc agacatttgc
301 tatattgacg ctgagctgtc aggggactca ggcttatgag gaggtattgt tacacaaaac
361 agtgtctagt gaagacgaca agaaagaggg gaaaggatcg gaaaaagaag ctaaaatact
421 atagaaaacc atgagatcta ttcgatcttt tgctaatgat gatcgccatg ttatggtgaa
481 acattcaaca atctatccat ctccggagga acttgaagct gttcagaata tggtatctac
541 tgttgaatgt gctcttaaac atgtctcaga ttggttggat gaaacaaata aaggcacaaa
601 aacagagggt gagacagaag tgaagaaaga tgaggccgga gaaaactatt ccaaggatca
661 aggtggtcgg acattgtgtg gtgtaatgag gattggcctg gttgcaaaag gcttgctgat
721 taaagatgat atggacttgg agctggtttt aatgtgcaaa gacaaaccca cagagaccct
781 gttaaataca gtcaaagata atcttcctat tcagattcag aaactcacag aagagaaata
841 tcaagtggaa caatgtgtaa atgaggcatc tattataatt cggaatacaa aagagcccac
901 gctaactttg aaggtgatac ttacctcacc tctaattagg gacgaattgg agaagaagga
961 tggagaaaat gtttcgatga aagatcctcc ggacttattg gacaggcaga aatgcctgaa
1021 cgccttggcg tctcttcgac atgccaaatg gtttcaggca agggcaaatg gattaaaatc
1081 atgtgtaatt gtcctccgca ttctgcgtga tttgtgcaac agagtcccca catgggcacc
1141 attgaaagga tggccactag aacttatatg tgaaaagtct ataggtactt gtaatagacc
1201 tttgggcgct ggggaggcct tgagacgagt aatggagtgt ttggcatctg gaatactact
1261 tcctgggggt cctggtcttc atgatccttg tgagcgagac ccaacagatg ctctgagcta
1321 tatgaccatc cagcaaaaag aagatattac ccacagtgca cagcatgcac tcagactatc
1381 agcctttggt cagatttaca aagtgctgga gatggacccc cttccatcta gtaagccttt
1441 tcagaagtat tcctggtcag ttactgataa agaaggtgct gggtcttcag ctctaaagag
1501 gccatttgaa gatggattag gggatgataa agaccccaac aagaagatga aacgaaactt
1561 aaggaaaatt ctggatagta aagcaataga ccttatgaat gcactaatga ggctaaatca
1621 gatcaggcct gggcttcagt ataagctcct atctcagtct ggccccgttc atgccccagt
1681 cttcacaatg tctgtagatg tggatggcac aacatatgaa gcctcaggac catccaagaa
1741 aacagcaaaa cttcacgtag cggtgaaggt attgcaggca atgggatatc caacaggctt
1801 tgatgcagat attgaatgta tgagttccga tgaaaaatca gataatgaaa gtaaaaatga
1861 aacagtgtct tcaaactcaa gcaataatac tggaaattct acaactgaaa cctccagtac
1921 cttagaggta agaactcagg gccctatcct cacagcaagt ggcaaaaacc ctgtaatgga
1981 gctcaatgaa aaaagaagag gtctcaagta tgaactcatc tcagagactg gtggaagcca
2041 tgacaagcgc tttgtaatgg aggtagaagt agatggacag aaattcagag gcgcaggtcc
2101 aaataagaaa gtggcaaagg cgagtgcagc tttagctgcc ttggagaaac tgttttctgg
2161 acccaatgcg gcaaataata agaaaaagaa gattatccct caggcaaagg gcgttgtgaa
2221 tacagctgtg tctgcagcag tccaagctgt tcggggcaga ggaagaggaa ctctaacaag
2281 gggagctttt gttggggcga cagctgctcc tggctacata gctccaggct atggaacacc
2341 atatggttac agcacagctg cccctgccta tggtttaccc aagagaatgg ttctgttacc
2401 cgttatgaaa tttccaacat atcctgttcc ccactactca ttcttttagc aaatgacaga
2461 agctaattcc tattgaacaa caatacagta caacacagaa tgttagagaa aaagcctttt
2521 tatcctgctt tctttgaaca catacttgat caaaattatt tgtaaagaac atctttccta
2581 ctttttgatt ttaacaaatg caaatttagt tctctaaaac ttgaaaaaaa aaagaaacca
2641 gttctgtgaa aacggtacct catttctgga aaataactta taccagccct tctgttctag
2701 ggaaataaaa gtctagcagt tcaaagttta agttttaaga gacgtatcag attatgtaaa
2761 attaaatttg tgaaggatgt atagagtctc aaacactgat cacaaataaa ctgctttgtt
2821 gtaacacaga gtactgcctg gttcctgatg cagtcactga ttcttagttg attgatatgt
2881 atttgcccca gggcacttta atttgggctg tagttatttt ttttaataca atagagactt
2941 ttcatttaac tttaactttg taaatattga agtgtgtaat aaagccaata aaatatgggt
3001 ttgaaaaaaa aaaaaaaaa
//