LOCUS BC017730 3238 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member 21,
mRNA (cDNA clone MGC:21476 IMAGE:3847246), complete cds.
ACCESSION BC017730
VERSION BC017730.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3238)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3238)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017730.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: i Column: 1.
FEATURES Location/Qualifiers
source 1..3238
/db_xref="H-InvDB:HIT000038109"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21476 IMAGE:3847246"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3238
/gene="TNFRSF21"
/gene_synonym="BM-018"
/gene_synonym="DR6"
/db_xref="GeneID:27242"
/db_xref="HGNC:HGNC:13469"
/db_xref="MIM:605732"
CDS 12..1979
/gene="TNFRSF21"
/gene_synonym="BM-018"
/gene_synonym="DR6"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 21"
/protein_id="AAH17730.1"
/db_xref="GeneID:27242"
/db_xref="HGNC:HGNC:13469"
/db_xref="MIM:605732"
/translation="MGTSPSSSTALASCSRIARRATATMIAGSLLLLGFLSTTTAQPE
QKASNLIGTYRHVDRATGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPVGTFTRHENG
IEKCHDCSQPCPWPMIEKLPCAALTDRECTCPPGMFQSNATCAPHTVCPVGWGVRKKG
TETEDVRCKQCARGTFSDVPSSVMKCKAYTDCLSQNLVVIKPGTKETDNVCGTLPSFS
SSTSPSPGTAIFPRPEHMETHEVPSSTYVPKGMNSTESNSSASVRPKVLSSIQEGTVP
DNTSSARGKEDVNKTLPNLQVVNHQQGPHHRHILKLLPSMEATGGEKSSTPIKGPKRG
HPRQNLHKHFDINEHLPWMIVLFLLLVLVVIVVCSIRKSSRTLKKGPRQDPSAIVEKA
GLKKSMTPTQNREKWIYYCNGHGIDILKLVAAQVGSQWKDIYQFLCNASEREVAAFSN
GYTADHERAYAALQHWTIRGPEASLAQLISALRQHRRNDVVEKIRGLMEDTTQLETDK
LALPMSPSPLSPSPIPSPNAKLENSALLTVEPSPQDKNKGFFVDESEPLLRCDSTSSG
SSALSRNGSFITKEKKDTVLRQVRLDPCDLQPIFDDMLHFLNPEELRVIEEIPQAEDK
LDRLFEIIGVKSQEASQTLLDSVYSHLPDLL"
BASE COUNT 819 a 805 c 748 g 866 t
ORIGIN
1 ccggttcagc catggggacc tctccgagca gcagcaccgc cctcgcctcc tgcagccgca
61 tcgcccgccg agccacagcc acgatgatcg cgggctccct tctcctgctt ggattcctta
121 gcaccaccac agctcagcca gaacagaagg cctcgaatct cattggcaca taccgccatg
181 ttgaccgtgc caccggccag gtgctaacct gtgacaagtg tccagcagga acctatgtct
241 ctgagcattg taccaacaca agcctgcgcg tctgcagcag ttgccctgtg gggaccttta
301 ccaggcatga gaatggcata gagaaatgcc atgactgtag tcagccatgc ccatggccaa
361 tgattgagaa attaccttgt gctgccttga ctgaccgaga atgcacttgc ccacctggca
421 tgttccagtc taacgctacc tgtgcccccc atacggtgtg tcctgtgggt tggggtgtgc
481 ggaagaaagg gacagagact gaggatgtgc ggtgtaagca gtgtgctcgg ggtaccttct
541 cagatgtgcc ttctagtgtg atgaaatgca aagcatacac agactgtctg agtcagaacc
601 tggtggtgat caagccgggg accaaggaga cagacaacgt ctgtggcaca ctcccgtcct
661 tctccagctc cacctcacct tcccctggca cagccatctt tccacgccct gagcacatgg
721 aaacccatga agtcccttcc tccacttatg ttcccaaagg catgaactca acagaatcca
781 actcttctgc ctctgttaga ccaaaggtac tgagtagcat ccaggaaggg acagtccctg
841 acaacacaag ctcagcaagg gggaaggaag acgtgaacaa gaccctccca aaccttcagg
901 tagtcaacca ccagcaaggc ccccaccaca gacacatcct gaagctgctg ccgtccatgg
961 aggccactgg gggcgagaag tccagcacgc ccatcaaggg ccccaagagg ggacatccta
1021 gacagaacct acacaagcat tttgacatca atgagcattt gccctggatg attgtgcttt
1081 tcctgctgct ggtgcttgtg gtgattgtgg tgtgcagtat ccggaaaagc tcgaggactc
1141 tgaaaaaggg gccccggcag gatcccagtg ccattgtgga aaaggcaggg ctgaagaaat
1201 ccatgactcc aacccagaac cgggagaaat ggatctacta ctgcaatggc catggtatcg
1261 atatcctgaa gcttgtagca gcccaagtgg gaagccagtg gaaagatatc tatcagtttc
1321 tttgcaatgc cagtgagagg gaggttgctg ctttctccaa tgggtacaca gccgaccacg
1381 agcgggccta cgcagctctg cagcactgga ccatccgggg ccccgaggcc agcctcgccc
1441 agctaattag cgccctgcgc cagcaccgga gaaacgatgt tgtggagaag attcgtgggc
1501 tgatggaaga caccacccag ctggaaactg acaaactagc tctcccgatg agccccagcc
1561 cgcttagccc gagccccatc cccagcccca acgcgaaact tgagaattcc gctctcctga
1621 cggtggagcc ttccccacag gacaagaaca agggcttctt cgtggatgag tcggagcccc
1681 ttctccgctg tgactctaca tccagcggct cctccgcgct gagcaggaac ggttccttta
1741 ttaccaaaga aaagaaggac acagtgttgc ggcaggtacg cctggacccc tgtgacttgc
1801 agcctatctt tgatgacatg ctccactttc taaatcctga ggagctgcgg gtgattgaag
1861 agattcccca ggctgaggac aaactagacc ggctattcga aattattgga gtcaagagcc
1921 aggaagccag ccagaccctc ctggactctg tttatagcca tcttcctgac ctgctgtaga
1981 acatagggat actgcattct ggaaattact caatttagtg gcagggtggt tttttaattt
2041 tcttctgttt ctgatttttg ttgtttgggg tgtgtgtgtg tgtttgtgtg tgtgtgtgtg
2101 tgtgtgtgtg tgtgtgttta acagagaata tggccagtgc ttgagttctt tctccttctc
2161 tctctctctt ttttttttaa ataactcttc tgggaagttg gtttataagc ctttgccagg
2221 tgtaactgtt gtgaaatacc caccactaaa gttttttaag ttccatattt tctccatttt
2281 gccttcttat gtattttcaa gattattctg tgcactttaa atttacttaa cttaccataa
2341 atgcagtgtg acttttccca cacactggat tgtgaggctc ttaacttctt aaaagtataa
2401 tggcatcttg tgaatcctat aagcagtctt tatgtctctt aacattcaca cctacttttt
2461 aaaaacaaat attattacta tttttattat tgtttgtcct ttataaattt tcttaaagat
2521 taagaaaatt taagacccca ttgagttact gtaatgcaat tcaactttga gttatctttt
2581 aaatatgtct tgtatagttc atattcatgg ctgaaacttg accacactat tgctgattgt
2641 atggttttca cctggacacc gtgtagaatg cttgattact tgtactcttc ttatgctaat
2701 atgctctggg ctggagaaat gaaatcctca agccatcagg atttgctatt taagtggctt
2761 gacaactggg ccaccaaaga acttgaactt caccttttag gatttgagct gttctggaac
2821 acattgctgc actttggaaa gtcaaaatca agtgccagtg gcgccctttc catagagaat
2881 ttgcccagct ttgctttaaa agatgtcttg ttttttatat acacataatc aataggtcca
2941 atctgctctc aaggccttgg tcctggtggg attccttcac caattacttt aattaaaaat
3001 ggctgcaact gtaagaaccc ttgtctgata tatttgcaac tatgctccca tttacaaatg
3061 taccttctaa tgctcagttg ccaggttcca atgcaaaggt ggcgtggact ccctttgtgt
3121 gggtggggtt tgtgggtagt ggtgaaggac cgatatcaga aaaatgcctt caagtgtact
3181 aatttattaa taaacattag gtgtttgtta aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//