LOCUS BC017725 2679 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 108, mRNA (cDNA clone
MGC:21371 IMAGE:3887324), complete cds.
ACCESSION BC017725
VERSION BC017725.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2679)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2679)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18201877.
FEATURES Location/Qualifiers
source 1..2679
/db_xref="H-InvDB:HIT000038105"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21371 IMAGE:3887324"
/tissue_type="Lung, carcinoma, large cell
undifferentiated."
/clone_lib="NIH_MGC_69"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2679
/gene="C20orf108"
/gene_synonym="5A3"
/gene_synonym="dJ1167H4.1"
/gene_synonym="DKFZP434A1114"
/db_xref="GeneID:116151"
/db_xref="HGNC:HGNC:16102"
CDS 37..615
/gene="C20orf108"
/gene_synonym="5A3"
/gene_synonym="dJ1167H4.1"
/gene_synonym="DKFZP434A1114"
/codon_start=1
/product="chromosome 20 open reading frame 108"
/protein_id="AAH17725.1"
/db_xref="GeneID:116151"
/db_xref="HGNC:HGNC:16102"
/translation="MAGLLALLGPAGRVGARVRPRATWLLGATAPCAPPPLALALLPP
RLDARLLRTARGDCRGHQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVS
LHIGISLISLGIFYMVVSSGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLF
VPVRISITLVSVPLIVRYFRKVGFFKPPAAKP"
BASE COUNT 721 a 617 c 616 g 725 t
ORIGIN
1 ggtcagcggc gcgggtgctg cgcctagctg cgcaccatgg ccgggttgct ggcgttgctg
61 ggtccggcag gcagggtggg cgcccgggtc cggcctcgcg ccacctggct cctgggcgcc
121 accgccccct gcgccccgcc gcccctggcc ctggccctgc tcccgcccag gctagacgcc
181 cggctgctcc gcacggcgcg cggggactgc cgcggccacc aggaccccag ccaggccacg
241 gggacaacag gcagcagcgt cagctgcaca gaggagaaaa agcaaagcaa gtcacagcaa
301 ctgaaaaaga tttttcaaga gtatggcact gttggcgtgt cattgcacat tggaatctca
361 ttaatttcct tgggcatatt ttacatggtt gtgtcaagtg gtgtggacat gcctgcaatc
421 ctgctgaaac tcggatttaa agagtccctg gtacagtcaa aaatggcagc aggcacaagt
481 accttcgtgg tggcctatgc aatccacaag ctgtttgtgc cagtgagaat cagcattacg
541 ctagtctctg tgcccttgat tgtcagatat tttcgaaaag tgggattttt taaacctcca
601 gctgcaaaac cttaatgaac tcttcagttg tacacactga aaacctattt cttctaaatt
661 acatgatttg gattggtttt agggttttag ggttgtaggg tttcttttgg agaggtaggg
721 ggctaattgc tatgttctca tggataaact ttgccagcaa aaatcaggct tttgaacaat
781 tttaattttt tgcctcataa attttgtgaa tgctattcat tatagggctt gtatatataa
841 tctaaaatgt cagcaaggca tcggagatgg gttaacatct caaaacaaaa tagcctacaa
901 atgttccttg tgggagactt tggcgagggt ctgtgggtaa aagcaccagg gggttaatct
961 tggctcagtt tcctaaaaag cattgattaa tttaactggc ttttaaatat ccccttccgc
1021 tgatatttgt tgtcagctgc ctacagttta atatgcagcg ttcacaaaac agctgccagt
1081 gctacaatta atgaagcaaa acttaatatg taatcacaat ctaaattagc atcaatactt
1141 tgacattcat tacattggtt tgggggaaga aaagtatttc tggtatgttt cattgatccc
1201 cagatacctt ccaatctgga catgatgggg ctgattccag atggtttttc tgaaatttca
1261 ttaaggtagg tcagcgtcat ttgtctctgt ttaggtaaaa tataaaaacc ctgcccagta
1321 gcagtggcat cgcttggttc ctgatgccca tgttccagag gaattcggat accacaaaca
1381 gctaagacaa tctcagcttt tcttagacaa tcttctatct caaacttcag acattccaga
1441 attgtcatga tgtttacact gtctgagtta aaaatcctgt tcaagaaaaa aaaagatttt
1501 gtatcacttc ttaaaaagga atattcatag cacttgtcac aaatagaagg caaccatgag
1561 ataatacaag ccagggagag gcttgtatta catgacaggt gtaattagtc tgctgagcca
1621 gctttaccca atgaagggca tatgtgttag agagattagc taagagtaga aattcgagca
1681 tagaggccag gtgcggtggc tcacgcctgt aatcccagca ctttgggagg ttgaggcagg
1741 cgtgtcactt gaggccagga gttcgagacc agcctggcca acatgatgaa accccgtctc
1801 tactacaaat acaaaaatta gccgggtgtg gtggcacacg cctgtagtcc cagctactgg
1861 ggaggctgag gcagcattgc ttgaacccag gaggtggagg ttgcagtgag ccaagatcac
1921 accactgcac tccagcctgg gcgacagagg gagacactgt ctccaaaaga aagaaatccc
1981 agcgtagatc caaactgaga cactgaggct tcgtccttat agtagtcagg agcaggcgat
2041 tgaagtaatt ctgtcctgcg gggttcagca tcatgcacgt tccccctggg ccattctctg
2101 atgcagggca cttgctccac actctgggaa cccagattca ccagtctgcc ctgtcacgta
2161 gttgaaggag ttgcatttat ctttctggct cctaattcct ttaaaattac atttgttgca
2221 gaacctccac aaggctaaat aaaattacat ttgtgaccat cagagaactg aataaaccat
2281 taactggcca tcctggtttt gcagagatca ggttgttgac agttcctggt tgacccacag
2341 ctacccatgt cagttatctc cactaacata tccaagaatc tttgtaggac aatttctcca
2401 cctgcaaggt ctttcaggta gaactcttct tttaaggcaa ttagcccatt gccaaaaggt
2461 tttactgtct taaagctgtc tttctgagat ctaattccaa ggacttctcc acagctaagt
2521 gagatgcctc acaccattag gtgatgcttt ggacagaaca gagtattttc atcttgtgtt
2581 taaagcaatt ccttggcttc ggctcctcac cactttctat gccagtctcc catttatgtc
2641 cctagtaatg cctatgcaaa aaaaaaaaaa aaaaaaaaa
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