LOCUS BC017714 2818 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens HNF1 homeobox B, mRNA (cDNA clone MGC:21262 IMAGE:4414015), complete cds. ACCESSION BC017714 VERSION BC017714.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: i Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4507396. FEATURES Location/Qualifiers source 1..2818 /db_xref="H-InvDB:HIT000038098" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21262 IMAGE:4414015" /tissue_type="Liver, adenocarcinoma" /clone_lib="NIH_MGC_90" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2818 /gene="HNF1B" /gene_synonym="FJHN" /gene_synonym="HNF1beta" /gene_synonym="HNF2" /gene_synonym="LFB3" /gene_synonym="MODY5" /gene_synonym="VHNF1" /db_xref="GeneID:6928" /db_xref="HGNC:HGNC:11630" /db_xref="MIM:189907" CDS 189..1862 /gene="HNF1B" /gene_synonym="FJHN" /gene_synonym="HNF1beta" /gene_synonym="HNF2" /gene_synonym="LFB3" /gene_synonym="MODY5" /gene_synonym="VHNF1" /codon_start=1 /product="HNF1 homeobox B" /protein_id="AAH17714.1" /db_xref="GeneID:6928" /db_xref="HGNC:HGNC:11630" /db_xref="MIM:189907" /translation="MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLE TLPLSPGSGAEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEE AAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPM KTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSHGPGQ SDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQR GVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGS PHHQPSSSPPNKLSGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPASLDPG HNLLSPDGKMISVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNT SQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQ NSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQCPLQAW" BASE COUNT 714 a 878 c 666 g 560 t ORIGIN 1 atcatggcaa gttagaagtt ttctgactcc tttcggagga gcctccggga ccccggggag 61 taacaggtgt ctggaggctg aagggtggag gggttcctgg atttggggtt tgcttgtgaa 121 actcccctcc accctcctct ctcgcaccca cccaccccct cacccccttc tttttccgtc 181 cttggaaaat ggtgtccaag ctcacgtcgc tccagcaaga actcctgagc gccctgctga 241 gctccggggt caccaaggag gtgctggttc aggccttgga ggagttgctg ccatccccga 301 acttcggggt gaagctggag acgctgcccc tgtcccctgg cagcggggcc gagcccgaca 361 ccaagccggt cttccatact ctcaccaacg gccacgccaa gggccgcttg tccggcgacg 421 agggctccga ggacggcgac gactatgaca cacctcccat cctcaaggag ctgcaggcgc 481 tcaacaccga ggaggcggcg gagcagcggg cggaggtgga ccggatgctc agtgaggacc 541 cttggagggc tgctaaaatg atcaagggtt acatgcagca acacaacatc ccccagaggg 601 aggtggtcga tgtcaccggc ctgaaccagt cgcacctctc ccagcatctc aacaagggca 661 cccctatgaa gacccagaag cgtgccgctc tgtacacctg gtacgtcaga aagcaacgag 721 agatcctccg acaattcaac cagacagtcc agagttctgg aaatatgaca gacaaaagca 781 gtcaggatca gctgctgttt ctctttccag agttcagtca acagagccat gggcctgggc 841 agtccgatga tgcctgctct gagcccacca acaagaagat gcgccgcaac cggttcaaat 901 gggggcccgc gtcccagcaa atcttgtacc aggcctacga tcggcaaaag aaccccagca 961 aggaagagag agaggcctta gtggaggaat gcaacagggc agaatgtttg cagcgagggg 1021 tgtccccctc caaagcccac ggcctgggct ccaacttggt cactgaggtc cgtgtctaca 1081 actggtttgc aaaccgcagg aaggaggagg cattccggca aaagctggcc atggacgcct 1141 atagctccaa ccagactcac agcctgaacc ctctgctctc ccacggctcc ccccaccacc 1201 agcccagctc ctctcctcca aacaagctgt caggagtgcg ctacagccag cagggaaaca 1261 atgagatcac ttcctcctca acaatcagtc accatggcaa cagcgccatg gtgaccagcc 1321 agtcggtttt acagcaagtc tccccagcca gcctggaccc aggccacaat ctcctctcac 1381 ctgatggtaa aatgatctca gtctcaggag gaggtttgcc cccagtcagc accttgacga 1441 atatccacag cctctcccac cataatcccc agcaatctca aaacctcatc atgacacccc 1501 tctctggagt catggcaatt gcacaaagcc tcaacacctc ccaagcacag agtgtccctg 1561 tcatcaacag tgtggccggc agcctggcag ccctgcagcc cgtccagttc tcccagcagc 1621 tgcacagccc tcaccagcag cccctcatgc agcagagccc aggcagccac atggcccagc 1681 agcccttcat ggcagctgtg actcagctgc agaactcaca catgtacgca cacaagcagg 1741 aaccccccca gtattcccac acctcccggt ttccatctgc aatggtggtc acagatacca 1801 gcagcatcag tacactcacc aacatgtctt caagtaaaca gtgtcctcta caagcctggt 1861 gatgcccaca caccacttac ttcgtgcgca acaacaagga ccctgttttc cacaccatca 1921 ccctctgggc agctgtcatg gaaaagccca gtgacctgac cagcacctgc gagaggtccc 1981 tgcttacctg acggacgtcc tgctggcacc tcagacaatc cactctcagg aggcgcagcc 2041 cgaagcccag tttcccttct atgcagtatt gccacaatgc ctctcccacg atgtcaagga 2101 ctcctgtctg tcctggaggt gggagacaag gaacctccga agaggaagca agaaagccgt 2161 actgtctatg ttgtgatcct tcatcgaaca aactgatgcg aaaacttgaa tctgttactg 2221 aaatgaggag agaaggacat gtgctattga actgagccaa acacactgta aatatccaca 2281 gactccctcc cctgccccca tcccaaatga tcttgagatt tcttttaaag aagtaaattt 2341 gtccaatggc tgtaaactat aaactactgt aattaagtgc aatttcccct ctgtgtcctc 2401 tcccctctgc cctgtatata atactaaagt gtctattagt tttctttgta aaggtcagag 2461 tcaaaatttc aaaagtgatc tgtcccctct cccctcatgg agaaacatcc taagtgggaa 2521 gtgaagcccc ttgtcctctc ccgcgggcct ggacacttat ggggacagca taccttggac 2581 tgactaccag ctaactccag tctcctgaca ttaagacaca cctctggatc cctggagggg 2641 ctgaatgtag tgtgtcagag taacatgcca gcttcctgtg ggccaggagc tcagccgtgc 2701 actccctaag aaaccccagg gcagggaaac tggctgtttg atagcagaag aaaaagttgc 2761 agtctcagaa agccttccat taaaacaatt tattttatca ctaaaaaaaa aaaaaaaa //