LOCUS BC017708 2939 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2Q family member 2, mRNA
(cDNA clone MGC:21212 IMAGE:3907760), complete cds.
ACCESSION BC017708
VERSION BC017708.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2939)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2939)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: i Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29789400.
FEATURES Location/Qualifiers
source 1..2939
/db_xref="H-InvDB:HIT000038092"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21212 IMAGE:3907760"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2939
/gene="UBE2Q2"
/db_xref="GeneID:92912"
/db_xref="HGNC:HGNC:19248"
CDS 209..1336
/gene="UBE2Q2"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2Q family member
2"
/protein_id="AAH17708.1"
/db_xref="GeneID:92912"
/db_xref="HGNC:HGNC:19248"
/translation="MSVSGLKAELKFLASIFDKNHERFRIVSWKLDELHCQFLVPQQG
SPHSLPPPLTLHCNITESYPSSSPIWFVDSEDPNLTSVLERLEDTKNNNLLRQQLKWL
ICELCSLYNLPKHLDVEMLDQPLPTGQNGTTEEVTSEEEEEEEEMAEDIEDLDHYEMK
EEEPISGKKSEDEGIEKENLAILEKIRKTQRQDHLNGAVSGSVQASDRLMKELRDIYR
SQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKD
NFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGK
ARVQFGANKNQYNLARAQQSYNSIVQIHEKNGWYTPPKEDG"
BASE COUNT 892 a 566 c 611 g 870 t
ORIGIN
1 tacaaaggaa gcgccaccca ggccgccaca cgccgaggct tccgcgcccc tcgccatttt
61 ccagcagcgc tcgacgaggc ggagccgcga gagcgcggcc caggccggcc ccgcggggcg
121 gtcgcggccg tgacggcggc tccgggcccg gctccccttc cgcgcccggc tccccttccg
181 cgcccctccc gccggagatg aggggaagat gtccgtgtca gggctcaagg ccgagctgaa
241 gttcctggcg tccatcttcg acaagaacca cgagcgattc cgcatcgtca gttggaagct
301 ggacgagctg cactgccagt tcctggtgcc gcagcagggc agcccgcact cgctgccgcc
361 gccactcacg ctccactgca acatcacgga atcctatcca tcttcttcac cgatatggtt
421 tgtggattct gaagacccaa atctgacatc agttctggaa cgtctagaag atactaagaa
481 caacaatttg cttcgtcagc aattgaagtg gttgatatgt gaactctgca gtttatataa
541 ccttcctaag cacctggatg ttgagatgct agatcaacca ctacccacgg gtcagaatgg
601 gacaacagaa gaagtgactt cagaagaaga ggaagaagaa gaagagatgg ctgaagatat
661 agaagactta gatcactatg agatgaagga agaagagcct attagtggga aaaagtcaga
721 ggatgaagga attgaaaaag aaaatttggc aatattagag aaaattagga agactcaaag
781 gcaagaccat ttaaatggtg cagtgtctgg gtcagtgcaa gcttcagata gacttatgaa
841 agagctcagg gacatataca gatcacagag ttataaaaca gggatttatt cagtggaact
901 cataaatgac agtttatatg actggcatgt taaactgcag aaggttgacc ctgatagtcc
961 tttgcacagt gatcttcaga tcttaaaaga aaaagaaggc atagaatata ttttgcttaa
1021 cttctctttt aaggataact ttccatttga tcctccattt gttcgagtgg tgttacctgt
1081 tctctcagga gggtatgtat tgggtggagg agcattatgt atggaacttc tcacaaaaca
1141 gggctggagc agtgcctact caatagaatc ggtcatcatg caaataaatg ccaccttagt
1201 caaaggcaaa gccagagtgc agtttggagc aaataagaat caatataatc tagcaagagc
1261 ccaacaatcc tataattcca ttgtacagat acatgagaaa aatggctggt acacccctcc
1321 aaaggaagat ggctaaatat gttgactgtt gtatgtttgg actaatgttg ctttaaagaa
1381 aatctttcca acatgcagac aaaagctttg agtgccccta ttacagcagt accgaagatg
1441 ttagttaata gatattttag tggataatct gtcatctgac atccagtata agttacagcc
1501 ttcgcatttt gctcatttta gatatcttgg actgagcagt ggggccttta ctgtattttt
1561 cctgataaat acacatactg gccactcctt atctcttttt cttgaaaagt gaacttttta
1621 aagcagccaa gtcaacatca ggctactgaa gttgaggctt tagggtaact ttcctatatt
1681 gagcccatgg gttacaagga tttgcaatat attgttccat ttacagccaa tacaggttta
1741 atcgatgttc aatattggtt taggaaattt aaggccttct aaatcataat agctctttca
1801 tgtctaaaac cattttatga tattgccaaa atgtgatagg aaacctactc attaaattgt
1861 taaacttttt aatgactatg tgaagatatg aattgtttcc tgaagataat actcttaatt
1921 gagttgtatt gtacttctta ggcaaagcag tgtaaaactg tatcaattaa ggcttgtgag
1981 tagtgatttc cactggggca tcagagtctt ggctgggctg aatctgctgc ttgttggttc
2041 agtgtttctt atgaacaaga gccacagtac agagcttcaa gttatttaaa atactaagtc
2101 atcttacgtt tccattttat taacgggatg ttgcaatcgt ttgtaaacta ataaacttat
2161 aaagtgattg gcacaaagac tccttgagca aaagctgtgc agttaagtac aaaaagatac
2221 ttaatttgga gactcttaca gtaatttttg ccatgtcaaa acaatggctt ttacattgaa
2281 agattaatag aaactctaca tatgttaatt tttttataga acctgactca aatcaaggta
2341 ctctccattt tattgcctta cctgaatcag tcctttttgg ttggtaatag atttttttat
2401 acacccacgt ttgatttaaa agtaaattct agttcttaag cacttttaac aagaaatcca
2461 gaagcacatt tttctgcaca aacaagttac aaagttcaaa agtgtttctt gtgcattagc
2521 tttgagattc agtttttaac tttgtaaacc acatctgaga gacttgtcat ttctacattg
2581 tgtgtgttta atttcttttg attccatttt ggttaagaga gcagtaaata gattttctgg
2641 tattcttgtt cacttgatta catttgtata aagttctgat tgccagttgc tcagataaca
2701 agtgacaagg cagaattctt taaatcagta aagttcctta agcctaaggc taaatcttga
2761 atacattgtt gaattcttta atatcctgat ggcaagcaga ctgatagctg cacatttggc
2821 atgctttgtt taatggattt tatttttaat tgcagattta tttggcaatg tacagtaaat
2881 tttgtaaact tgcatcaagt ttatgaataa agaaccattt aaaaaaaaaa aaaaaaaaa
//