LOCUS BC017561 2042 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein interacting with PRKCA 1, mRNA (cDNA clone
MGC:15204 IMAGE:4026028), complete cds.
ACCESSION BC017561
VERSION BC017561.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017561.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47157318.
FEATURES Location/Qualifiers
source 1..2042
/db_xref="H-InvDB:HIT000038049"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15204 IMAGE:4026028"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2042
/gene="PICK1"
/gene_synonym="MGC15204"
/db_xref="GeneID:9463"
/db_xref="HGNC:HGNC:9394"
/db_xref="MIM:605926"
CDS 209..1456
/gene="PICK1"
/gene_synonym="MGC15204"
/codon_start=1
/product="protein interacting with PRKCA 1"
/protein_id="AAH17561.1"
/db_xref="GeneID:9463"
/db_xref="HGNC:HGNC:9394"
/db_xref="MIM:605926"
/translation="MFADLDYDIEEDKLGIPTVPGKVTLQKDAQNLIGISIGGGAQYC
PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYN
KLQADPKQGMSLDIVLKKVKHRLVENMSSGTADALGLSRAILCNDGLVKRLEELERTA
ELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFVKFADAHRSIE
KFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVKEMDDEEYS
CIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQDIVFQL
QRLVSTMSKYYNDCYAVLRDADVFPIEVDLAHTTLAYGLNQEEFTDGEEEEEEEDTAA
GEPSRDTRGAAGPLDKGGSWCDS"
BASE COUNT 436 a 588 c 659 g 359 t
ORIGIN
1 gtgggttcag gtaccagcct ggccgggacc cggctgtggg accaacgctt ccggtgagcg
61 acagaggcag ctccccaggg cctggagacc cgtggggcgg actctgggat ctgagcctat
121 cgccctggcc tggagccccc ctttgtacct attccccatt cccctaccga gctgggcagt
181 tagccagccc actccaactc tcggaaccat gtttgcagac ttggattatg acatcgaaga
241 ggataaactc ggaatcccga ctgtgcctgg gaaggtgacc ctgcagaagg atgctcagaa
301 cctgatcggg atcagcattg gaggaggggc ccagtactgt ccctgcctct atatcgtcca
361 ggtatttgac aacaccccag cagccttgga cggcacagtg gcagctggcg atgagatcac
421 cggtgtcaat ggcaggtcaa tcaaagggaa aactaaggtg gaggtggcga agatgattca
481 ggaggtgaag ggggaggtga ccatccacta caacaagctg caggcggacc ccaagcaggg
541 catgtccctg gacattgtgt tgaagaaagt caagcaccgg ctggtggaga acatgagttc
601 agggaccgca gatgctctgg gcctgagccg ggccatcctg tgcaatgatg ggcttgtcaa
661 gaggctagag gagctggagc ggaccgctga gctatacaaa gggatgacgg aacacaccaa
721 gaacctccta cgggcctttt atgagctgtc gcagactcac cgggcctttg gggacgtgtt
781 ctccgtgatc ggggtgcggg agccccagcc agctgcgagc gaggcttttg tgaagttcgc
841 cgatgcccac cgcagcatcg agaagttcgg cattcggctt ctgaaaacca tcaagccgat
901 gctgacggat ctgaacacgt acctcaacaa agccatcccg gacactcgcc tcaccatcaa
961 gaagtacctg gacgtgaagt ttgagtacct gtcgtactgc ctgaaggtga aggagatgga
1021 tgacgaggaa tacagctgca ttgccctagg cgagcccctt taccgggtga gcaccggcaa
1081 ctatgagtac cgcctgatcc tgcgctgccg ccaggaggcg cgcgcccgct tctcccagat
1141 gcgcaaggat gtgctggaga agatggagct gctggaccag aagcacgtcc aggacatcgt
1201 gttccagctg cagcgcctcg tgtccaccat gtccaagtac tacaacgact gctacgcagt
1261 gctgcgggat gccgacgtct tccccatcga ggtagacctg gcgcacacca cattggccta
1321 tggcctcaac caggaggagt tcacagatgg ggaggaggag gaggaggagg aagacacggc
1381 agctggggag ccgtccaggg atacacgagg ggctgctggg cccttggaca agggtggaag
1441 ctggtgtgac tcctgagtgc cccgcggctg tggtgccggg ggcagggtgc gtgggaggac
1501 ggagcctggg agcggggcgg ggccgccgcg caagggggcg acgcataaag gcctgctggc
1561 ttggggcgcc tgcctccctg ctcctctgtc ctcgcacagc gaacctgggc tcctgcccag
1621 gacaggcacc agggtcatgg cctgggacct ggacactggc ccctccaccc tccctcccct
1681 cccggctccc cggccagagg gagagcttgg tctctggacc tgccttagga aggagaggga
1741 gggcaggaag gaaaagaaag gacttggagg tggcaggagt ccgagccctg ctccttgtgg
1801 gcgctcacac tgcccccgga gcctgctggg agtggggcca gccgtggaca gctgaggttg
1861 gggtcaatgc ctcctgggca cccttgcctc gccccagacc ggcccgtcca gtccccatca
1921 cacctcggcg gcctttattt attctgttcc cccagctcgg ccacttctct gaaggagggc
1981 tgggttctgg gcctgtatcg aataaacaca aacctggatg gcgcaaaaaa aaaaaaaaaa
2041 aa
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