LOCUS BC017558 1119 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone
MGC:9614 IMAGE:3910031), complete cds.
ACCESSION BC017558
VERSION BC017558.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1119)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1119)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: g Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505217.
FEATURES Location/Qualifiers
source 1..1119
/db_xref="H-InvDB:HIT000038047"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9614 IMAGE:3910031"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1119
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
CDS 122..532
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/codon_start=1
/product="H3 histone, family 3B (H3.3B)"
/protein_id="AAH17558.1"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 302 a 223 c 288 g 306 t
ORIGIN
1 gtttggtcgt tcgttgggcg gtgctggttt ttcgctcgtc gactgcggct cttcctcggg
61 cagcggaagc ggcgcggcgg tcggagaagt ggcctaaaac ttcggcgttg ggtgaaagaa
121 aatggcccga accaagcaga ctgctcgtaa gtccaccggt gggaaagccc cccgcaaaca
181 gctggccacg aaagccgcca ggaaaagcgc tccctctacc ggcggggtga agaagcctca
241 tcgctacagg cccgggaccg tggcgcttcg agagattcgt cgttatcaga agtcgaccga
301 gctgctcatc cggaagctgc ccttccagag gttggtgagg gagatcgcgc aggatttcaa
361 aaccgacctg aggtttcaga gcgcagccat cggtgcgctg caggaggcta gcgaagcgta
421 cctggtgggt ctgttcgaag ataccaacct gtgtgccatc cacgctaaga gagtcaccat
481 catgcccaaa gacatccagt tggctcgccg gatacgggga gagagagctt aagtgaaggc
541 agtttttatg gcgttttgta gtaaattctg taaaatactt tggtttaatt tgtgactttt
601 tttgtaagaa attgtttata atatgttgca tttgtactta agtcattcca tctttcactc
661 aggatgaatg cgaaaagtga ctgttcacag acctcagtga tgtgagcact gttgctcagg
721 agtgacaagt tgctaatatg cagaagggat gggtgatact tcttgcttct catgatgcat
781 gtttctgtat gttaatgact tgttgggtag ctattaaggt actagagttg ataaatgtgt
841 acagggtcct tttgcaataa aactggttat gacttgatcc aagtgtttaa caattggggc
901 tgttaagtct gaccatacat cactgtgata gaatgtgggc tttttcaagg gtgaagatac
961 aagtcttaac cacagtgtaa cttacagttt cctttaaaaa aaaaaaaaag taaacctggc
1021 agctatagaa tacactatgt gcatttataa tagctatttt atatattgta gtatcaacat
1081 ttttaaatta aatgttttac attcaaaaaa aaaaaaaaa
//