LOCUS BC017553 1952 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens TRAF and TNF receptor associated protein, mRNA (cDNA clone MGC:9099 IMAGE:3920790), complete cds. ACCESSION BC017553 VERSION BC017553.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1952) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1952) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC017553.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: m Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23510347. FEATURES Location/Qualifiers source 1..1952 /db_xref="H-InvDB:HIT000038043" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9099 IMAGE:3920790" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1952 /gene="TTRAP" /gene_synonym="AD022" /gene_synonym="dJ30M3.3" /gene_synonym="EAP2" /gene_synonym="MGC9099" /gene_synonym="RP1-30M3.3" /db_xref="GeneID:51567" /db_xref="HGNC:HGNC:17768" /db_xref="MIM:605764" CDS 38..1126 /gene="TTRAP" /gene_synonym="AD022" /gene_synonym="dJ30M3.3" /gene_synonym="EAP2" /gene_synonym="MGC9099" /gene_synonym="RP1-30M3.3" /codon_start=1 /product="TRAF and TNF receptor associated protein" /protein_id="AAH17553.1" /db_xref="GeneID:51567" /db_xref="HGNC:HGNC:17768" /db_xref="MIM:605764" /translation="MELGSCLEGGREAAEEEGEPEVKKRRLLCVEFASVASCDAAVAQ CFLAENDWEMERALNSYFEPPVEESALERRPETISEPKTYVDLTNEETTDSTTSKISP SEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSY LKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGN ELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGL PNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSL DLLGLEKLDCGRFPSDHWGLLCNLDIIL" BASE COUNT 614 a 337 c 441 g 560 t ORIGIN 1 cccacgcgtc cgggggcggt gcagaggcgg caggaagatg gagttgggga gttgcctgga 61 gggcgggagg gaggcggcgg aggaagaggg cgagcctgag gtgaaaaagc ggcgacttct 121 gtgtgtggag tttgcctcgg tcgcaagctg cgatgccgca gtggctcagt gcttcctggc 181 cgagaacgac tgggagatgg aaagggctct gaactcctac ttcgagcctc cggtggagga 241 gagcgccttg gaacgccgac ctgaaaccat ctctgagccc aagacctatg ttgacctaac 301 caatgaagaa acaactgatt ccaccacttc taaaatcagc ccatctgaag atactcagca 361 agaaaatggc agcatgttct ctctcattac ctggaatatt gatggattag atctaaacaa 421 tctgtcagag agggctcgag gggtgtgttc ctacttagct ttgtacagcc cagatgtgat 481 atttctacag gaagttattc ccccatatta tagctaccta aagaagagat caagtaatta 541 tgagattatt acaggtcatg aagaaggata tttcacagct ataatgttga agaaatcaag 601 agtgaaatta aaaagccaag agattattcc ttttccaagt accaaaatga tgagaaacct 661 tttatgtgtg catgtgaatg tgtcaggaaa tgagctttgc cttatgacat cccatttgga 721 gagcaccaga gggcatgctg cggaacgaat gaatcagtta aaaatggttt taaagaaaat 781 gcaagaggct ccagagtcag ctacagttat atttgcagga gatacaaatc taagggatcg 841 agaggttacc agatgtggtg gtttacccaa caacattgtg gatgtctggg agtttttggg 901 caaacctaaa cattgccagt atacatggga tacacaaatg aactctaatc ttggaataac 961 tgctgcttgt aaacttcgtt ttgatcgaat atttttcaga gcagcagcag aagagggaca 1021 cattattccc cgaagtttgg accttcttgg attagaaaaa ctggactgtg gtagatttcc 1081 tagtgatcac tggggtcttc tgtgcaactt agatataata ttgtaaaatg cttttcaagt 1141 gtgggttttg ccctgattgt tgcaaataca atttccacct tctggaaagg taggtttgct 1201 gtggaggaaa taatgtacta gatcattgtc acagaaaaac caactatgat ttatggttgt 1261 gttttcagaa ttcaacatta aagattaatg tttatttaaa cgaacacatt cctgcattca 1321 ggatgtgagg ccatttaata aaaagggcac aaagcctgtc agagttttca acggtgctta 1381 tagctgccag ctggattcca aacaggtacc ccattgtctc tgagctaatg tttatatttt 1441 tccattcagg caccgaaata gttaatattt aaaataagtc ttcaaaagaa aacataagag 1501 attattgagt tcttgggact ggatccttta tttcataagt tcagatcatc ttaaatgaaa 1561 atgccatgat tatctgcagt taagtagatg acagctattc tacatcagac ttgatttttg 1621 tcagctaatt acataattgg taagctataa ttgaaacctt atggcttaaa attccttaac 1681 tcctttttga ttcatgtttg tagtcatgtt gtcaacagag gcaaagttaa gcttgatgat 1741 ggttaaaatc ggtttgatag caccatggga catttttcta acaaaaataa atgcatgaag 1801 agacatagcc ttttagtttt gctaattgtg aaatggaaat gctttacagg aagtaaatgc 1861 aaattacttt taagtgtgct ttaaagaaaa atattttccc cacaagagaa atttaaataa 1921 agaattttat ttgtttaaaa aaaaaaaaaa aa //