LOCUS BC017553 1952 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TRAF and TNF receptor associated protein, mRNA (cDNA
clone MGC:9099 IMAGE:3920790), complete cds.
ACCESSION BC017553
VERSION BC017553.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC017553.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23510347.
FEATURES Location/Qualifiers
source 1..1952
/db_xref="H-InvDB:HIT000038043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9099 IMAGE:3920790"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1952
/gene="TTRAP"
/gene_synonym="AD022"
/gene_synonym="dJ30M3.3"
/gene_synonym="EAP2"
/gene_synonym="MGC9099"
/gene_synonym="RP1-30M3.3"
/db_xref="GeneID:51567"
/db_xref="HGNC:HGNC:17768"
/db_xref="MIM:605764"
CDS 38..1126
/gene="TTRAP"
/gene_synonym="AD022"
/gene_synonym="dJ30M3.3"
/gene_synonym="EAP2"
/gene_synonym="MGC9099"
/gene_synonym="RP1-30M3.3"
/codon_start=1
/product="TRAF and TNF receptor associated protein"
/protein_id="AAH17553.1"
/db_xref="GeneID:51567"
/db_xref="HGNC:HGNC:17768"
/db_xref="MIM:605764"
/translation="MELGSCLEGGREAAEEEGEPEVKKRRLLCVEFASVASCDAAVAQ
CFLAENDWEMERALNSYFEPPVEESALERRPETISEPKTYVDLTNEETTDSTTSKISP
SEDTQQENGSMFSLITWNIDGLDLNNLSERARGVCSYLALYSPDVIFLQEVIPPYYSY
LKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGN
ELCLMTSHLESTRGHAAERMNQLKMVLKKMQEAPESATVIFAGDTNLRDREVTRCGGL
PNNIVDVWEFLGKPKHCQYTWDTQMNSNLGITAACKLRFDRIFFRAAAEEGHIIPRSL
DLLGLEKLDCGRFPSDHWGLLCNLDIIL"
BASE COUNT 614 a 337 c 441 g 560 t
ORIGIN
1 cccacgcgtc cgggggcggt gcagaggcgg caggaagatg gagttgggga gttgcctgga
61 gggcgggagg gaggcggcgg aggaagaggg cgagcctgag gtgaaaaagc ggcgacttct
121 gtgtgtggag tttgcctcgg tcgcaagctg cgatgccgca gtggctcagt gcttcctggc
181 cgagaacgac tgggagatgg aaagggctct gaactcctac ttcgagcctc cggtggagga
241 gagcgccttg gaacgccgac ctgaaaccat ctctgagccc aagacctatg ttgacctaac
301 caatgaagaa acaactgatt ccaccacttc taaaatcagc ccatctgaag atactcagca
361 agaaaatggc agcatgttct ctctcattac ctggaatatt gatggattag atctaaacaa
421 tctgtcagag agggctcgag gggtgtgttc ctacttagct ttgtacagcc cagatgtgat
481 atttctacag gaagttattc ccccatatta tagctaccta aagaagagat caagtaatta
541 tgagattatt acaggtcatg aagaaggata tttcacagct ataatgttga agaaatcaag
601 agtgaaatta aaaagccaag agattattcc ttttccaagt accaaaatga tgagaaacct
661 tttatgtgtg catgtgaatg tgtcaggaaa tgagctttgc cttatgacat cccatttgga
721 gagcaccaga gggcatgctg cggaacgaat gaatcagtta aaaatggttt taaagaaaat
781 gcaagaggct ccagagtcag ctacagttat atttgcagga gatacaaatc taagggatcg
841 agaggttacc agatgtggtg gtttacccaa caacattgtg gatgtctggg agtttttggg
901 caaacctaaa cattgccagt atacatggga tacacaaatg aactctaatc ttggaataac
961 tgctgcttgt aaacttcgtt ttgatcgaat atttttcaga gcagcagcag aagagggaca
1021 cattattccc cgaagtttgg accttcttgg attagaaaaa ctggactgtg gtagatttcc
1081 tagtgatcac tggggtcttc tgtgcaactt agatataata ttgtaaaatg cttttcaagt
1141 gtgggttttg ccctgattgt tgcaaataca atttccacct tctggaaagg taggtttgct
1201 gtggaggaaa taatgtacta gatcattgtc acagaaaaac caactatgat ttatggttgt
1261 gttttcagaa ttcaacatta aagattaatg tttatttaaa cgaacacatt cctgcattca
1321 ggatgtgagg ccatttaata aaaagggcac aaagcctgtc agagttttca acggtgctta
1381 tagctgccag ctggattcca aacaggtacc ccattgtctc tgagctaatg tttatatttt
1441 tccattcagg caccgaaata gttaatattt aaaataagtc ttcaaaagaa aacataagag
1501 attattgagt tcttgggact ggatccttta tttcataagt tcagatcatc ttaaatgaaa
1561 atgccatgat tatctgcagt taagtagatg acagctattc tacatcagac ttgatttttg
1621 tcagctaatt acataattgg taagctataa ttgaaacctt atggcttaaa attccttaac
1681 tcctttttga ttcatgtttg tagtcatgtt gtcaacagag gcaaagttaa gcttgatgat
1741 ggttaaaatc ggtttgatag caccatggga catttttcta acaaaaataa atgcatgaag
1801 agacatagcc ttttagtttt gctaattgtg aaatggaaat gctttacagg aagtaaatgc
1861 aaattacttt taagtgtgct ttaaagaaaa atattttccc cacaagagaa atttaaataa
1921 agaattttat ttgtttaaaa aaaaaaaaaa aa
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