LOCUS BC017503 2713 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cerebellar degeneration-related protein 2, 62kDa, mRNA (cDNA clone MGC:23119 IMAGE:4873337), complete cds. ACCESSION BC017503 VERSION BC017503.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2713) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2713) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 55770831. FEATURES Location/Qualifiers source 1..2713 /db_xref="H-InvDB:HIT000038040" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23119 IMAGE:4873337" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2713 /gene="CDR2" /gene_synonym="CDR62" /gene_synonym="Yo" /db_xref="GeneID:1039" /db_xref="HGNC:HGNC:1799" /db_xref="MIM:117340" CDS 291..1655 /gene="CDR2" /gene_synonym="CDR62" /gene_synonym="Yo" /codon_start=1 /product="cerebellar degeneration-related protein 2, 62kDa" /protein_id="AAH17503.2" /db_xref="GeneID:1039" /db_xref="HGNC:HGNC:1799" /db_xref="MIM:117340" /translation="MLAENLVEEFEMKEDEPWYDHQDLQQDLQLAAELGKTLLDRNTE LEDSVQQMYTTNQEQLQEIEYLTKQVELLRQMNEQHAKVYEQLDVTARELEETNQKLV ADSKASQQKILSLTETIECLQTNIDHLQSQVEELKSSGQGRRSPGKCDQEKPAPSFAC LKELYDLRQHFVYDHVFAEKITSLQGQPSPDEEENEHLKKTVTMLQAQLSLERQKRVT MEEEYGLVLKENSELEQQLGATGAYRARALELEAEVAEMRQMLQSEHPFVNGVEKLVP DSLYVPFKEPSQSLLEEMFLTVPESHRKPLKRSSSETILSSLAGSDIVKGHEETCIRR AKAVKQRGISLLHEVDTQYSALKVKYEELLKKCQEEQDSLSHKAVQTSRAAAKDLTGV NAQSEPVASGWELASVNPEPVSSPTTPPEYKALFKEIFSCIKKTKQEIDEQRTKYRSL SSHS" BASE COUNT 771 a 620 c 722 g 600 t ORIGIN 1 gcccggcggc ggcgtgaaga ctggcggctg cgtgagactc cggctccagg cgttcgcacc 61 gtaatgcccg gccgttgggg ccgtcggtag gcgcgaggcg agtcgaggca gccggccggt 121 cggcggccgc cggcgggaac ggggctgagg cggcgcagcg gagtctgggc ggcggcgcgt 181 cccgcccgag ggcggctctg gctgagggcg gaggggccgg ggaagagccc ggggcagcgg 241 ctgaggcggg acggcggcgg gggccgctgc ccctagaaga cccagccgag atgctggcgg 301 aaaacctggt agaggagttt gagatgaagg aggacgagcc gtggtacgac caccaggacc 361 tccagcaaga tcttcaactt gctgctgagc ttgggaagac attactggat cggaacacag 421 agttggagga ctctgttcag cagatgtata caaccaatca ggagcagtta caggaaattg 481 agtatctgac gaagcaagtg gaacttctac ggcagatgaa cgaacaacat gcaaaggttt 541 atgaacaatt agacgtcaca gcaagggaac tggaagaaac aaatcaaaag ctagttgctg 601 acagcaaggc ctcacagcaa aagattctga gcctgactga aacgattgaa tgcctgcaaa 661 ccaacattga tcacctccag agccaagtgg aggagctgaa gtcatctggc caagggagaa 721 ggagcccggg aaagtgtgac caggagaaac cggcacccag ctttgcatgt ctgaaggagc 781 tgtatgacct ccgccaacac ttcgtgtatg atcatgtgtt cgctgagaag atcacttcct 841 tgcaaggtca gccaagccct gatgaagagg aaaatgagca cttgaaaaaa acagtgacaa 901 tgttgcaggc ccagctgagc ctggagcggc agaagcgggt gactatggag gaggaatatg 961 ggctcgtgtt aaaggagaac agtgaactgg agcagcagct gggggccaca ggtgcctacc 1021 gagcacgggc gctggaacta gaggccgagg tggcagagat gcgacagatg ttgcagtcag 1081 agcatccatt tgtgaatgga gttgagaagc tggtgccaga ctctctgtat gttcctttca 1141 aagagcccag ccagagcctg ctggaagaga tgttcctgac tgtgccggaa tcacatagaa 1201 agcctctcaa gcgcagcagc agtgagacga tcctcagcag cttggcaggg agtgacatcg 1261 tgaagggcca cgaggagacc tgcatcagga gggccaaggc tgtgaaacag aggggcatct 1321 cccttctgca cgaagtggac acgcagtaca gcgccctgaa ggtgaagtat gaagagttgc 1381 tgaagaagtg ccaagaggaa caggactccc tgtcacacaa ggctgtgcag acctccaggg 1441 ctgcagccaa ggacctgact ggagtgaacg cccagtctga gcctgttgcc agcggctggg 1501 aactggcctc tgtcaaccca gagcccgtga gttcccctac aacacctcca gaatacaaag 1561 cgttgtttaa ggagatcttt agttgcatca agaaaactaa gcaggaaata gatgaacaga 1621 gaacaaaata ccgatcactc tcctctcatt cttaattgaa cctctagctc tactactaat 1681 ttgcctattg cctatcgcct ctctctccca ttcagacaag tgtttgtaga ctctgaagcc 1741 taatgttact catgacgttt gcctcattgc tttgcttatt tagcaaatgc atacaacgag 1801 gaaaggaggt ggctagtggt atcagttctc tgatccactt ccatttaagc tccccaggaa 1861 atcccatgac aaactggcct ctggctggcg cgctgattag acttcagttc ctgaaaagga 1921 ccagtggagg gaagagctat acttctggag aagtaggcct ggagttacta cagtatgggg 1981 gaaaagggtc gagttagaac aaagctaagg caattcctat tgcttccttg cgcaacttct 2041 caaaacgatg aaagtcagaa ggctgtcaaa ctcaaatatc tttgcaaaca ctgtttgaat 2101 actgtgaatt cattacgaag aatgttcgag agaaagcagg ggtctaatcc aaaagaaatg 2161 tcattaacca atactccaag tccttgagtt ttgttatatc tgaactagtt gaactgtgac 2221 tgacaggtaa tcttaatata tccaaatcca actgaatacc aaattgagat ggcaaatttt 2281 tgtttgatat aagttagctt gttagcatat gccctagagg gcctccatcc ctgtattcta 2341 atgtttttac tcaaagctct agcctttagg ataggtgaat atgtaaatct tttatcactt 2401 tctcaaattc aaactaaagg ggaaagatca aaccccttcc cttcctacct gttttctgag 2461 ctggctgact tgccagccac aagctgctct tgcagagttc ttaccattcc tgtaaatgtt 2521 ttgacttgtt gcagaaattc ctatctactt tattaagcag tattgatctg actgtggaaa 2581 catcctctca cttgcattct tttaacttaa aactatttaa gaactgatgt tccgattatt 2641 gtatatattt ttctaaaaac caaataaagc tacctatgaa aatgaaaaaa aaaaaaaaaa 2701 aaaaaaaaaa aaa //