LOCUS BC017468 1174 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens spermatogenesis associated 20, mRNA (cDNA clone
IMAGE:3906576), partial cds.
ACCESSION BC017468
VERSION BC017468.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1174)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1174)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: a Column: 6.
FEATURES Location/Qualifiers
source 1..1174
/db_xref="H-InvDB:HIT000089310"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3906576"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1174
/gene="SPATA20"
/gene_synonym="FLJ21347"
/gene_synonym="FLJ21969"
/gene_synonym="SSP411"
/gene_synonym="Tisp78"
/db_xref="GeneID:64847"
CDS <1..973
/gene="SPATA20"
/gene_synonym="FLJ21347"
/gene_synonym="FLJ21969"
/gene_synonym="SSP411"
/gene_synonym="Tisp78"
/codon_start=2
/product="SPATA20 protein"
/protein_id="AAH17468.1"
/db_xref="GeneID:64847"
/translation="ELTAARFGLDVEAVRTLLNSGLEKLFQARKHRPKPHLDSKMLAA
WNGLMVSGYAVTGAVLGQDRLINYATNGAKFLKRHMFDVASGRLMRTCYTGPGGTVEH
SNPPCWGFLEDYAFVVRGLLDLYEASQESAWLEWALRLQDTQDRLFWDSQGGGYFCSE
AELGAGLPLRLKDDQDGAEPSANSVSAHNLLRLHGFTGHKDWMDKCVCLLTAFSERMR
RVPVALPEMVRALSAQQQTLKQIVICGDRQAKDTKALVQCVHSVYIPNKVLILADGDP
SSFLSRQLPFLSTLRRLEDQATAYVCENQACSVPITDPCELRKLLHP"
BASE COUNT 234 a 359 c 350 g 231 t
ORIGIN
1 ggagctgact gctgcccgct ttggcttgga tgtggaggcc gtgcggacct tgctcaattc
61 agggctggag aagctcttcc aggcccggaa gcatcggccc aagccgcacc tggacagcaa
121 gatgctggct gcctggaatg gcttgatggt gtcaggctat gctgtgactg gggctgtcct
181 gggccaagac aggctgatca actatgccac caatggtgcc aagttcctga agcggcacat
241 gtttgatgtg gccagtggcc gcctgatgcg gacctgctac accggccctg gggggactgt
301 ggagcacagc aacccaccct gctggggctt cctggaggac tacgccttcg tggtgcgggg
361 cctgctggac ctgtatgagg cctcacagga gagtgcgtgg ctcgagtggg ctctgcggct
421 gcaggacaca caggacaggc tcttttggga ctcccagggt ggcggctact tctgcagtga
481 ggctgagctg ggggctggcc tgcccctgcg tctgaaggac gaccaggatg gagcagagcc
541 cagcgccaat tccgtgtcag cccacaacct gctccggctg catggcttca cgggccacaa
601 ggactggatg gacaagtgtg tgtgcctatt gaccgccttt tccgagcgca tgcgtcgtgt
661 cccggtggcg ttgcccgaga tggtccgcgc cctctcagcc cagcagcaga ccctcaagca
721 gatcgtgatc tgtggagacc gtcaggccaa ggacaccaag gccctggtgc agtgcgtcca
781 ctctgtctac attcctaaca aggtgctgat tctggctgat ggggacccct cgagcttcct
841 gtcccgccag ctgcctttcc tgagtaccct ccgacggttg gaagaccagg ccactgcata
901 tgtgtgtgag aatcaagcct gctcagtgcc catcactgat ccctgcgaat tacgaaaact
961 actacatcca tgactgcccc aacccccttg gggtggggca gaaggtgaag catcccaact
1021 gactagagac tcaggccctg cagggcccta tagaacctgt ggccatccct gagcaccctg
1081 ccaccaggtg acctcggcca tactcactgc cccccttggg cacccactca ccctagaata
1141 aacttaacag tgtcccgtga aaaaaaaaaa aaaa
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