LOCUS BC017445 2585 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens erythrocyte membrane protein band 4.9 (dematin), mRNA
(cDNA clone MGC:15601 IMAGE:3162732), complete cds.
ACCESSION BC017445
VERSION BC017445.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2585)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2585)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (13-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: j Column: 21.
FEATURES Location/Qualifiers
source 1..2585
/db_xref="H-InvDB:HIT000038012"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15601 IMAGE:3162732"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2585
/gene="EPB49"
/gene_synonym="DEMATIN"
/gene_synonym="DMT"
/db_xref="GeneID:2039"
/db_xref="MIM:125305"
CDS 273..1490
/gene="EPB49"
/gene_synonym="DEMATIN"
/gene_synonym="DMT"
/codon_start=1
/product="EPB49 protein"
/protein_id="AAH17445.1"
/db_xref="GeneID:2039"
/db_xref="MIM:125305"
/translation="MERLQKQPLTSPGSVSPSRDSSVPGSPSSIVAKMDNQVLGYKDL
AAIPKDKAILDIERPDLMIYEPHFTYSLLEHVELPRSRERSLSPKSTSPPPSPEVWAD
SRSPGIISQASAPRTTGTPRTSLPHFHHPETSRPDSNIYKKPPIYKQRESVGGSPQTK
HLIEDLIIESSKFPAAQPPDPNQPAKIETDYWPCPPSLAVVETEWRKRKASRRGAEEE
EEEEDDDSGEEMKALRERQREELSKVTSNLGKMILKEEMEKSLPIRRKTRSLPDRTPF
HTSLHQGTSKSSSLPAYGRTTLSRLQSTEFSPSGSETGSPGLQNGEGQRGRMDRGNSL
PCVLEQKIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLAL
WKRNELKKKASLF"
misc_feature 1380..1487
/gene="EPB49"
/gene_synonym="DEMATIN"
/gene_synonym="DMT"
/note="VHP; Region: Villin headpiece domain"
/db_xref="CDD:smart00153"
BASE COUNT 555 a 822 c 730 g 478 t
ORIGIN
1 gttgcctggt tgtgagagtc aggggagcag ggacaggtcc aagacaagga aggcagttgg
61 gctgtgggaa tggggagccc agggaaggcc tccagagctg gcctggagag tcaccgccga
121 gggatgagga cgcgccagcc cgggggaacg cgccagctgc tttcgcggcc ccaagcgcgc
181 agtgcccagc agccgcgccg agcctgacac gctgtcctct cccctcgcgc acagggctct
241 gcgagtgacc cggcgggcga gctccgtgct gcatggaacg gctgcagaag caaccactta
301 cctcccccgg gagcgtgagc ccctcccgag attccagtgt gcctggctct ccctccagca
361 tcgtggccaa gatggacaat caggtgctgg gctacaagga cctggctgcc atccccaagg
421 acaaggccat cctggacatc gagcggcccg acctcatgat ctacgagcct cacttcactt
481 attccctcct ggaacacgtg gagctgcctc gcagccgcga gcgctcgctg tcacccaaat
541 ccacatcccc cccaccatcc ccagaggtgt gggcggacag ccggtcgcct ggaatcatct
601 ctcaggcctc ggcccccaga accactggaa ccccccggac cagcctgccc catttccacc
661 accctgagac ctcccgccca gattccaaca tctacaagaa gcctcccatc tataagcaga
721 gagagtccgt gggaggcagc cctcagacca agcacctcat cgaggatctc atcatcgagt
781 catccaagtt tcctgcagcc cagcccccag accccaacca gccagccaaa atcgaaaccg
841 actactggcc atgccccccg tctctggctg ttgtggagac agaatggagg aagcggaagg
901 cgtctcggag gggagcagag gaagaggagg aggaggaaga tgacgactct ggagaggaga
961 tgaaggctct cagggagcgt cagagagagg aactcagtaa ggttacttcc aacttgggaa
1021 agatgatctt gaaagaagag atggaaaagt cattgccgat ccgaaggaaa acccgctctc
1081 tgcctgaccg gacacccttc catacctcct tgcaccaggg aacgtctaaa tcttcctctc
1141 tccccgccta tggcaggacc accctgagcc ggctacagtc cacagagttc agcccatcag
1201 ggagtgagac tggaagccca ggcctgcaga acggagaggg ccagaggggg aggatggacc
1261 gggggaactc cctgccctgt gtgctggagc agaagatcta tccctatgaa atgctagtgg
1321 tgaccaacaa ggggcgaacc aagctgccac cgggggtgga tcggatgcgg cttgagaggc
1381 atctgtctgc cgaggacttc tcaagggtat ttgccatgtc ccctgaagag tttggcaagc
1441 tggctctgtg gaagcggaat gagctcaaga agaaggcctc tctcttctga tggcccccac
1501 ctgctccggg acggccccct tacccctgct gcttcagggt ttttccccgg cgggttggga
1561 ggggcaggag gtggggtgga aatagggtgg gctcctttcc tcaggtagag tggggggcca
1621 aaacctctgc agtccccggc agtgagctat ggactttctt ccccctcaca aggctggggg
1681 cctcctgctc tcgtccctgg ccctccctgc acagggcaaa gccagtctgg gctctggcac
1741 acagagttca tgtttgcgcc ctctccctgc ccctcacccc agagggtgag gaggaatgag
1801 gggcattggt ggttaggccg gttggctgtc ttgaacagct ggagggaaga tgcaggggtg
1861 ggaagcggcc aggcagaaag agctccaggc tcttgtgtcg cccacccagc cctcccatac
1921 tcactcctga cagctttcct gcactgcagc ttcctgctcc tctgactcta gtgggaacag
1981 gccccagctc agcctccggc agggaggtca cccctccact tcagcttgcc ctgacctccg
2041 ctcgcaaacc ccgagcttcc aagccttttg ctccagccct gcggcttccc cagaagcctg
2101 ggcttagggt ggagatgccg cctacacacg atcctggccc tccacctgcc tccaggccac
2161 gaaatgggaa ttccagcact aagccaggca ccgggcagaa gctgggcctt ccgcctccct
2221 tggatggggt caagaggcca ggcctggcac attttggagt gtcctggcta ccagctttca
2281 cctacaccca cgcacccccc cacacactat gctctctcaa gaatgtaatt tattggggcc
2341 ccccccagct gctttcctca cctgcccctg ccctacctta cacccccagc ttgacttctt
2401 tccagtccac gtgtgtatat aatgatatct atatttttgc ccaggtctgg gtattgctcc
2461 tgcccagacc ctgacatccc tttccactgt gtgtgtgacc atgctggggg agggggactc
2521 tgcttggaat taaaaggttg cattgggtcc ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaa
//