LOCUS BC017433 2488 bp mRNA linear HUM 26-APR-2004
DEFINITION Homo sapiens glucosidase, alpha; neutral AB, mRNA (cDNA clone
IMAGE:2959208), partial cds.
ACCESSION BC017433
VERSION BC017433.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2488)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2488)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (13-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 28, 2003 this sequence version replaced BC017433.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: c Column: 10.
FEATURES Location/Qualifiers
source 1..2488
/db_xref="H-InvDB:HIT000038003"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2959208"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2488
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/db_xref="GeneID:23193"
/db_xref="MIM:104160"
CDS <1..1467
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/codon_start=1
/product="GANAB protein"
/protein_id="AAH17433.2"
/db_xref="GeneID:23193"
/db_xref="MIM:104160"
/translation="ASKRRKLVAIVDPHIKVDSGYRVHEELRNLGLYVKTRDGSDYEG
WCWPGSAGYPDFTNPTMRAWWANMFSYDNYEGSAPNLFVWNDMNEPSVFNGPEVTMLK
DAQHYGGWEHRDVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQRFGAVWT
GDNTAEWDHLKISIPMCLSLGLVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFR
AHAHLDTGRREPWLLPSQHNDIIRDALGQRYSLLPFWYTLLYQAHREGIPVMRPLWVQ
YPQDVTTFNIDDQYLLGDALLVHPVSDSGAHGVQVYLPGQGEVWYDIQSYQKHHGPQT
LYLPVTLSSIPVFQRGGTIVPRWMRVRRSSECMKDDPITLFVALSPQGTAQGELFLDD
GHTFNYQTRQEFLLRRFSFSGNTLVSSSADPEGHFETPIWIERVVIIGAGKPAAVVLQ
TKGSPESRLSFQHDPETSVLVLRKPGINVASDWSIHLR"
misc_feature 1..1347
/gene="GANAB"
/gene_synonym="G2AN"
/gene_synonym="GluII"
/gene_synonym="KIAA0088"
/note="Glyco_hydro_31; Region: Glycosyl hydrolases family
31. Glycosyl hydrolases are key enzymes of carbohydrate
metabolism. Family 31 comprises of enzymes that are, or
similar to, alpha- galactosidases"
/db_xref="CDD:pfam01055"
BASE COUNT 545 a 656 c 644 g 643 t
ORIGIN
1 gcttctaaga ggcggaagct ggtggccatc gtagaccccc acatcaaggt ggactccggc
61 taccgagttc acgaggagct gcggaacctg gggctgtatg ttaaaacccg ggatggctct
121 gactatgagg gctggtgctg gccaggctca gctggttacc ctgacttcac taatcccacg
181 atgagggcct ggtgggctaa catgttcagc tatgacaatt atgagggctc agctcccaac
241 ctctttgtct ggaatgacat gaacgaacca tctgtgttca atggtcctga ggtcaccatg
301 ctcaaggatg cccagcatta tgggggctgg gagcaccggg atgtgcataa catctatggc
361 ctttatgtgc acatggcgac tgctgatggg ctgagacagc gctctggggg catggaacgc
421 ccctttgtcc tggccagggc cttcttcgct ggctcccagc gctttggagc cgtgtggaca
481 ggggacaaca ctgccgagtg ggaccatttg aagatctcta ttcctatgtg tctcagcttg
541 gggctggtgg gactttcctt ctgtggggcg gatgtgggtg gcttcttcaa aaacccagag
601 ccagagctgc ttgtgcgctg gtaccagatg ggtgcttacc agccattctt ccgggcacat
661 gcccacttgg acactgggcg acgagagcca tggctgttac catctcagca caatgatata
721 atccgagatg ccttgggcca gcgatattct ttgctgccct tctggtacac cctcttatat
781 caggcccatc gggaaggcat tcctgtcatg aggcccctgt gggtgcagta ccctcaggat
841 gtgactacct tcaatataga tgatcagtac ttgcttgggg atgcgttgct ggttcaccct
901 gtatcagact ctggagccca tggtgtccag gtctatctgc ctggccaagg ggaggtgtgg
961 tatgacattc aaagctacca gaagcatcat ggtccccaga ccctgtacct gcctgtaact
1021 ctaagcagta tccctgtgtt ccagcgtgga gggacaatcg tgcctcgatg gatgcgagtg
1081 cggcggtctt cagaatgtat gaaggatgac cccatcactc tctttgttgc acttagccct
1141 cagggtacag ctcaaggaga gctctttctg gatgatgggc acacgttcaa ctatcagact
1201 cgccaagagt tcctgctgcg tcgattctca ttctctggca acacccttgt ctccagctca
1261 gcagaccctg aaggacactt tgagacacca atctggattg agcgggtggt gataataggg
1321 gctggaaagc cagcagctgt ggtactccag acaaaaggat ctccagaaag ccgcctgtcc
1381 ttccagcatg accctgagac ctctgtgttg gtcctgcgca agcctggcat caatgtggca
1441 tctgattgga gtattcacct gcgataaccc aagggatgtt ctgggttagg gggagggaag
1501 gggagcatta gtgctgagag atattctttc ttctgccttg gagttcggcc ctccccagac
1561 ttcacttatg ctagtctaag acccagattc tgccaacatt tgggcaggat gagagggctg
1621 accctgggct ccaaattcct cttgtgatct cctcacctct cccactccat tgataccaac
1681 tctttccctt cattccccca acatcctgtt gctctaactg gagcacattc acttacgaac
1741 accaggaaac cacagggccc ttgtcgcccc ttctctttcc cttatttagg agccctgaac
1801 tcccccagag tctatccatt catgcctctt gtatgttgat gccacttctt ggaagaagat
1861 gagggcaatg agttagggct ccttttcccc ttccctccca ccagattgct ctcccacctt
1921 tcatttcttc ctccaggctt tactcccctt tttatgcccc accgatacac tgggaccacc
1981 ccttaccccg gacaggatga atggatcaaa ggagtgaggt tgctaaagaa catccttttc
2041 cctctcattc tacccttttc ctctccccga ttccttgtag agctgctgca attcttagag
2101 gggcagttct acctcctctg tccctcggca gaaagacgtt tccacacctc ttaggggatg
2161 cgcattaaac ttcttttgcc cccttcttgt cccctttgag gggcacttaa gatggagaaa
2221 tcagttgtgg tttcagtgaa tcatggtcac ctgtatttat tgctaggaga agcctgaggg
2281 tggggggaga tgatcatgtg tgctcggggt tggctggaag ccctgggtgg ggggttgggg
2341 gaggactaat ggggagtcgg ggaatatttg tgggtatttt ttttacttcc tcttggttcc
2401 cagctgtgac acgttttgat caaaggagaa acaataaagg gataacccat aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//