LOCUS BC017366 2454 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 8, mRNA (cDNA clone MGC:1191 IMAGE:3506054), complete cds. ACCESSION BC017366 VERSION BC017366.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2454) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2454) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (13-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC017366.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: f Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24496777. FEATURES Location/Qualifiers source 1..2454 /db_xref="H-InvDB:HIT000037972" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1191 IMAGE:3506054" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2454 /gene="CNOT8" /gene_synonym="CAF1" /gene_synonym="CALIF" /gene_synonym="hCAF1" /gene_synonym="POP2" /db_xref="GeneID:9337" /db_xref="MIM:603731" CDS 182..1060 /gene="CNOT8" /gene_synonym="CAF1" /gene_synonym="CALIF" /gene_synonym="hCAF1" /gene_synonym="POP2" /codon_start=1 /product="CNOT8 protein" /protein_id="AAH17366.1" /db_xref="GeneID:9337" /db_xref="MIM:603731" /translation="MPAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFP GVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFN LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGY DFGYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDL QRIGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS AQEKMSILAIINNMQQ" misc_feature 182..970 /gene="CNOT8" /gene_synonym="CAF1" /gene_synonym="CALIF" /gene_synonym="hCAF1" /gene_synonym="POP2" /note="Region: COG5228, POP2, mRNA deadenylase subunit [RNA processing and modification]" /db_xref="CDD:COG5228" BASE COUNT 705 a 471 c 529 g 749 t ORIGIN 1 aaaagagctc cgggccaggg gctgccgtcg ccgccgtcgg ggagtcagcc cgccagcccg 61 ccagctcgtc agcccgccag ccagcgcttc gcgggccctg tcggtcccga tcagaccaaa 121 cattgtctgg cttgcactgt aaaactagtt agctgaagac gacttctcag gtttcttcag 181 gatgcctgca gcacttgtgg agaatagcca ggttatctgt gaagtgtggg ccagtaatct 241 agaagaagag atgaggaaga tccgagaaat cgtgctcagt tacagttata ttgccatgga 301 cacagaattt ccaggtgttg tggtgcgacc aattggtgaa tttcgtagtt ccatagatta 361 ccaatatcag cttctgcggt gcaatgttga ccttttaaaa attatccagc tgggccttac 421 attcacaaat gagaagggag agtatccttc tggaatcaat acttggcagt tcaatttcaa 481 atttaacctt acagaggaca tgtactccca ggattccata gatctccttg ctaactcagg 541 actacagttt cagaagcatg aagaggaagg gattgacaca ctgcactttg cagagctgct 601 tatgacatca ggagtggttc tctgtgacaa tgtcaaatgg ctttcatttc atagtggcta 661 tgattttggc tatatggtaa agttgcttac agattctcgt ttgccagaag aggaacatga 721 attctttcat attctgaacc ttttcttccc atccatttat gatgtgaaat acctgatgaa 781 gagctgcaaa aatcttaagg gaggtcttca ggaagttgct gatcagttgg atttgcagag 841 gattggaagg cagcaccagg caggctcaga ctcactgctg acaggaatgg ctttctttag 901 gatgaaagag ttgttttttg aggacagcat tgatgatgcc aagtactgtg ggcggctcta 961 tggcttaggc acaggagtgg cccagaagca gaatgaggat gtggactctg cccaggagaa 1021 gatgagcatc ctggcgatta tcaacaacat gcagcagtga tggcgccagg ctctgcaggg 1081 tgggcctgat cccagagtgg tgcttactgt gctgactgtg tacttatctt ccccaagaga 1141 aaatgcttct tttgaccaca ctgtacctac catctgcatt gagcagaaag acttttgttt 1201 tactgaagac aaaagatgtt tttattttag acccagaaga gaggagtttg ctctgaattt 1261 gtaaataagt cttccccatt cctcatactc gagcctctcc tctctggttg cctcctgcca 1321 ccagcatcca tggctcattt gacacctttt taaatatcag gacaagtctg aaacaaagta 1381 gtaaaatgta tataactctt acctgttgtc attctttttc ttttaaattt gttgctaatc 1441 tctgataatg aagattctta ctctgattct cagctgagct gtgagggctt ccagggaaaa 1501 tggaacaaaa tggtgttctt aggtaatggg ttgtagatac tgagtcttcc tttccttttc 1561 tgacccttct cgaggacatt tgctttcctc acacttttgt agtctctctt tacatattac 1621 tatatggaaa tgaattgctc tgtgctgaaa tttgaagacc agataatgaa actgaaaagc 1681 aaacaatttt actgaatctg tctacccttc attcatgaga actccagaat gagtgttgac 1741 cactgaagca tcttttaagt ctgtgttcca ttgtgccatt caggtttgct gtcacatatg 1801 catcatctga aatcatttga aatttttgta caataaaata tcctggattt gatcctgaag 1861 gaaactagta agatcagatt tttgggtcat gtctgttgta ttttcagtaa tgtgatttca 1921 gatggtcatc tggattctcc cacttctcta ctccattatt tctctacttt tccttccagc 1981 aaacctgaaa cgtgagggag atggattaat gtgagtaaca ggaatgtgtc tttaaaaagc 2041 tagagtggtt acatttaatc aggcagtaag ataatttggg ttcttgagtt gttttggagt 2101 aatatcccac aactggggta ggaagctcag gacttttttc tttaaagcta gtcatttcaa 2161 aagcatattg tatttttttg aatgactaca gtatggacaa tttcaaaaac caaaacccac 2221 tttggattgg tggaagtaaa aactggtaac tcactcaagt gaatgaatgg tcttgcattt 2281 taaaagctta tgggaaactc aatttgaaat gattagaaaa tgtcaagtat tataagctgg 2341 tatttaagat gcttgtaaat actatttatg tttttaattt tgtaaaataa agatttcttt 2401 ttaaccactg gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa //