LOCUS BC017338 2056 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens fucosidase, alpha-L- 1, tissue, mRNA (cDNA clone
MGC:29579 IMAGE:4871788), complete cds.
ACCESSION BC017338
VERSION BC017338.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2056)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2056)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC017338.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: h Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475878.
FEATURES Location/Qualifiers
source 1..2056
/db_xref="H-InvDB:HIT000037953"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29579 IMAGE:4871788"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2056
/gene="FUCA1"
/db_xref="GeneID:2517"
/db_xref="HGNC:HGNC:4006"
/db_xref="MIM:230000"
CDS 22..1407
/gene="FUCA1"
/codon_start=1
/product="fucosidase, alpha-L- 1, tissue"
/protein_id="AAH17338.1"
/db_xref="GeneID:2517"
/db_xref="HGNC:HGNC:4006"
/db_xref="MIM:230000"
/translation="MRSRPAGPALLLLLLFLGAAESVRRAQPPRRYTPDWPSLDSRPL
PAWFDEAKFGVFIHWGVFSVPAWGSEWFWWHWQGEGRPQYQRFMRDNYPPGFSYADFG
PQFTARFFHPEEWADLFQAAGAKYVVLTTKHHEGFTNWPSPVSWNWNSKDVGPHRDLV
GELGTALRKRNIRYGLYHSLLEWFHPLYLLDKKNGFKTQHFVSAKTMPELYDLVNSYK
PDLIWSDGEWECPDTYWNSTNFLSWLYNDSPVKDEVVVNDRWGQNCSCHHGGYYNCED
KFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEESEIISELVQTVSLGGNYLLNI
GPTKDGLIVPIFQERLLAVGKWLSINGEAIYASKPWRVQWEKNTTSVWYTSKGSAVYA
IFLHWPENGVLNLESPITTSTTKITMLGIQGDLKWSTDPDKGLFISLPQLPPSAVPAE
FAWTIKLTGVK"
BASE COUNT 543 a 487 c 501 g 525 t
ORIGIN
1 gtagcgatgc gggctccggg gatgaggtcg cggccggcgg gtcccgcgct gttgctgctg
61 ctgctcttcc tcggagcggc cgagtcggtg cgtcgggccc agcctccgcg ccgctacacc
121 ccagactggc cgagcctgga ttctcggccg ctgccggcct ggttcgacga agccaagttc
181 ggggtgttca tccactgggg cgtgttctcg gtgcccgcct ggggcagcga gtggttctgg
241 tggcactggc agggcgaggg gcggccgcag taccagcgct tcatgcgcga caactacccg
301 cccggcttca gctacgccga cttcggaccg cagttcactg cgcgcttctt ccacccggag
361 gagtgggccg acctcttcca ggccgcgggc gccaagtatg tagttttgac gacaaagcat
421 cacgaaggct tcacaaactg gccgagtcct gtgtcttgga actggaactc caaagacgtg
481 gggcctcatc gggatttggt tggtgaattg ggaacagctc tccggaagag gaacatccgc
541 tatggactat accactcact cttagagtgg ttccatccac tctatctact tgataagaaa
601 aatggcttca aaacacagca ttttgtcagt gcaaaaacaa tgccagagct gtacgacctt
661 gttaacagct ataaacctga tctgatctgg tctgatgggg agtgggaatg tcctgatact
721 tactggaact ccacaaattt tctttcatgg ctctacaatg acagccctgt caaggatgag
781 gtggtagtaa atgaccgatg gggtcagaac tgttcctgtc accatggagg atactataac
841 tgtgaagata aattcaagcc acagagcttg ccagatcaca agtgggagat gtgcaccagc
901 attgacaagt tttcctgggg ctatcgtcgt gacatggcat tgtctgatgt tacagaagaa
961 tctgaaatca tttcggaact ggttcagaca gtaagtttgg gaggcaacta tcttctgaac
1021 attggaccaa ctaaagatgg actgattgtt cccatcttcc aagaaaggct tcttgctgtt
1081 gggaaatggc tgagcatcaa tggggaggct atctatgcct ccaaaccatg gcgggtgcaa
1141 tgggaaaaga acacaacatc tgtatggtat acctcaaagg gatcggctgt ttatgccatt
1201 tttctgcact ggccagaaaa tggagtctta aaccttgaat cccccataac tacctcaact
1261 acaaagataa caatgctggg aattcaagga gatctgaagt ggtccacaga tccagataaa
1321 ggtctcttca tctctctacc ccagttgcca ccctctgctg tccccgcaga gtttgcttgg
1381 actataaagc tgacaggagt gaagtaatca tttgagtgca agaagaaaga ggcgctgctc
1441 actgttttcc tgcttcagtt tttctcttat agtaccatca ctataatcaa cgaacttctc
1501 ttctccaccc agagatggct tttccaacac attttaatta aaggaactga gtacattacc
1561 ctgatgtcta aatggaccaa agatctgaga tccattgtga ttatatctgt atcaggtcag
1621 cagaagaagg aactgagcag ttgaactctg agttcatcaa ttgtaatatt tggaaattat
1681 ctacaatgga atcttccctc tgttctctga taacctactt gcttactcaa tgcctttaag
1741 ccaagtcacc ctgttgccta tgggaggagg tggaaggatt tggcaagctc aaccacatgc
1801 tatttagtta gcatcagttg tcaccaacag tctttctgca aagggcagga gagctttggg
1861 ggaaaggaaa aggcttacca ggctgctatg gtcaactctt cagaaatttt cagagcaatc
1921 taaaagcgcc aaaattcgct atgtttacag tgatactatt aagaaaatga atgtgattct
1981 gctctgtctt tttaagtatg atcaaataaa aaatttgtac atcacaatca tttctaccaa
2041 aaaaaaaaaa aaaaaa
//