LOCUS BC017335 1825 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 85, mRNA (cDNA clone MGC:29782
IMAGE:4642600), complete cds.
ACCESSION BC017335
VERSION BC017335.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017335.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308451.
FEATURES Location/Qualifiers
source 1..1825
/db_xref="H-InvDB:HIT000037950"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29782 IMAGE:4642600"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1825
/gene="WDR85"
/gene_synonym="FLJ90634"
/gene_synonym="RP11-48C7.3"
/db_xref="GeneID:92715"
/db_xref="HGNC:HGNC:25199"
CDS 118..1476
/gene="WDR85"
/gene_synonym="FLJ90634"
/gene_synonym="RP11-48C7.3"
/codon_start=1
/product="WD repeat domain 85"
/protein_id="AAH17335.1"
/db_xref="GeneID:92715"
/db_xref="HGNC:HGNC:25199"
/translation="MMGCFALQTVDTELTADSVEWCPLQGCRHLLACGTYQLRRPEDR
PAGPQNKGGMEVKEPQVRLGRLFLYSFNDNNSIHPLVEVQRKDTSAILDMKWCHIPVA
GHALLGLADASGSIQLLRLVESEKSHVLEPLSSLALEEQCLALSLDWSTGKTGRAGDQ
PLKIISSDSTGQLHLLMVNETRPRLQKVASWQAHQFEAWIAAFNYWHPEIVYSGGDDG
LLRGWDTRVPGKFLFTSKRHTMGVCSIQSSPHREHILATGSYDEHILLWDTRNMKQPL
ADTPVQGGVWRIKWHPFHHHLLLAACMHSGFKILNCQKAMEERQEATVLTSHTLPDSL
VYGADWSWLLFRSLQRAPSWSFPSNLGTKTADLKGASELPTPCHECREDNDGEGHARP
QSGMKPLTEGMRKNGTWLQATAATTRDCGVNPEEADSAFSLLATCSFYDHALHLWEWE
GN"
BASE COUNT 415 a 518 c 526 g 366 t
ORIGIN
1 gtccctgggg ctctgcgctc gtccggccgg ccccggcctc gccgccccgc gcagtaccca
61 gcccggcccc gccgacccgc ctctactgcc ggctccgcgc ccttccccga gggctggatg
121 atgggctgtt tcgccctgca aacggtggac accgagctga ccgcggactc ggtggagtgg
181 tgcccgctgc aaggctgcag gcacctgctg gcgtgcggga cctaccagct gcggcggccg
241 gaggaccggc ctgccggccc ccagaacaag ggtggaatgg aagttaagga gcctcaggtc
301 cgtttaggcc gtctcttcct gtacagtttc aatgacaaca actctattca ccctctggtc
361 gaggtccaaa gaaaagatac ttctgcaatc ctggacatga aatggtgtca catcccggtg
421 gctggacatg ccctcttggg cttggcagat gccagtggat ccatacaact gctccgcctg
481 gtggaatctg agaagagcca cgtgctggag ccattgtcca gccttgccct ggaggagcag
541 tgtctggctt tgtccctaga ttggtccact gggaaaactg gaagggccgg ggaccagccc
601 ttgaagatca tcagcagtga ctccacaggg cagctccacc tcctgatggt gaatgagacg
661 aggcccaggc tgcagaaagt ggcctcatgg caggcacatc aattcgaggc ctggattgct
721 gctttcaatt actggcatcc agaaattgtg tattcagggg gcgacgatgg ccttctgagg
781 ggctgggaca ccagggtacc cggcaaattt ctcttcacca gcaaaagaca caccatgggt
841 gtgtgcagca tccagagcag ccctcatcgg gagcacatcc tggccacggg aagctatgat
901 gaacacatcc tactgtggga cacacgaaac atgaagcagc cgttggcaga tacgcctgtg
961 cagggtgggg tatggagaat caagtggcac cctttccacc accacctgct cctggccgcc
1021 tgcatgcaca gtggctttaa gatcctcaac tgccaaaagg caatggagga gaggcaggag
1081 gcgacggtcc tgacatctca cacattgccc gactcgctgg tgtatggagc cgactggtcc
1141 tggctgctct tccgttctct gcagcgggcc ccctcgtggt cctttcctag caacctagga
1201 accaagacgg cagacctgaa gggtgcaagc gagttgccaa caccctgtca tgaatgcaga
1261 gaggataacg atggggaggg ccatgccaga ccccagagtg gaatgaagcc actcacagag
1321 ggcatgagga agaatggcac ctggctgcag gctacagcag ccaccacacg tgactgtggc
1381 gtgaacccag aagaagcaga ctcagccttc agcctcctgg ccacctgctc cttctatgac
1441 catgcgctcc acctctggga gtgggagggg aactgagctt gaaatcatga agccccttcc
1501 cacaaggaaa ccaggaggga gactgcgagt gagtgcccgg gaccacctca tcagagatgc
1561 ttactgcagc cctgcaggtg cctgtgcact gatggaatcc acagtgtagt cagaaaagct
1621 gttgacttct cttaaatcag cttccctgct gggcccctga aagtggactg ggtgattctg
1681 tctggcagag agtggggaaa agacgcggtt tccagcttgc agatttgtta agtttctcag
1741 gcagattttg actttcagcc tttcatactt gtttaagcaa ctatttgtat taaatgaagt
1801 tttttgaaaa aaaaaaaaaa aaaaa
//