LOCUS BC017327 2346 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens fermitin family homolog 2 (Drosophila), mRNA (cDNA
clone MGC:29726 IMAGE:4547604), complete cds.
ACCESSION BC017327
VERSION BC017327.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017327.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: d Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29789005.
FEATURES Location/Qualifiers
source 1..2346
/db_xref="H-InvDB:HIT000037946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29726 IMAGE:4547604"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2346
/gene="FERMT2"
/gene_synonym="KIND2"
/gene_synonym="mig-2"
/gene_synonym="MIG2"
/gene_synonym="UNC112"
/gene_synonym="UNC112B"
/db_xref="GeneID:10979"
/db_xref="HGNC:HGNC:15767"
/db_xref="MIM:607746"
CDS 187..2229
/gene="FERMT2"
/gene_synonym="KIND2"
/gene_synonym="mig-2"
/gene_synonym="MIG2"
/gene_synonym="UNC112"
/gene_synonym="UNC112B"
/codon_start=1
/product="fermitin family homolog 2 (Drosophila)"
/protein_id="AAH17327.1"
/db_xref="GeneID:10979"
/db_xref="HGNC:HGNC:15767"
/db_xref="MIM:607746"
/translation="MALDGIRMPDGCYADGTWELSVHVTDLNRDVTLRVTGEVHIGGV
MLKLVEKLDVKKDWSDHALWWEKKRTWLLKTHWTLDKYGIQADAKLQFTPQHKLLRLQ
LPNMKYVKVKVNFSDRVFKAVSDICKTFNIRHPEELSLLKKPRDPTKKKKKKLDDQSE
DEALELEGPLITPGSGSIYSSPGLYSKTMTPTYDAHDGSPLSPTSAWFGDSALSEGNP
GILAVSQPITSPEILAKMFKPQALLDKAKINQGWLDSSRSLMEQDVKENEALLLRFKY
YSFFDLNPKYDAIRINQLYEQAKWAILLEEIECTEEEMMMFAALQYHINKLSIMTSEN
HLNNSDKEVDEVDAALSDLEITLEGGKTSTILGDITSIPELADYIKVFKPKKLTLKGY
KQYWCTFKDTSISCYKSKEESSGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEG
MNEIWLRCDNEKQYAHWMAACRLASKGKTMADSSYNLEVQNILSFLKMQHLNPDPQLI
PEQITTDITPECLVSPRYLKKYKNKQITARILEAHQNVAQMSLIEAKMRFIQAWQSLP
EFGITHFIARFQGGKKEELIGIAYNRLIRMDASTGDAIKTWRFSNMKQWNVNWEIKMV
TVEFADEVRLSFICTEVDCKVVHEFIGGYIFLSTRAKDQNESLDEEMFYKLTSGWV"
BASE COUNT 740 a 499 c 545 g 562 t
ORIGIN
1 gggtggagcg cggggagcca ggcgaggggc cgcgacgacg ggactccatt agccgctccg
61 gccacaggca gcgcttcgcc agccgaggaa ccggacgcgg acaccgccgc cccgcgagcc
121 tccagcccct cgcctgttgc cgcgcgagtc ccgggcccgg agcgctagga gcgcgcggaa
181 ggagccatgg ctctggacgg gataaggatg ccagatggct gctacgcgga cgggacgtgg
241 gaactgagtg tccatgtgac ggacctgaac cgcgatgtca ccctgagagt gaccggcgag
301 gtgcacattg gaggcgtgat gcttaagctg gtggagaaac tcgatgtaaa aaaagattgg
361 tctgaccatg ctctctggtg ggaaaagaag agaacttggc ttctgaagac acattggacc
421 ttagataagt atggtattca ggcagatgct aagcttcagt tcacccctca gcacaaactg
481 ctccgcctgc agcttcccaa catgaagtat gtgaaggtga aagtgaattt ctctgataga
541 gtcttcaaag ctgtttctga catctgtaag acttttaata tcagacaccc cgaagaactt
601 tctctcttaa agaaacccag agatccaaca aagaaaaaaa agaagaagct agatgaccag
661 tctgaagatg aggcacttga attagagggg cctcttatca ctcctggatc aggaagtata
721 tattcaagcc caggactgta tagtaaaaca atgaccccca cttatgatgc tcatgatgga
781 agccccttgt caccaacttc tgcttggttt ggtgacagtg ctttgtcaga aggcaatcct
841 ggtatacttg ctgtcagtca accaatcacg tcaccagaaa tcttggcaaa aatgttcaag
901 cctcaagctc ttcttgataa agcaaaaatc aaccaaggat ggcttgattc ctcaagatct
961 ctcatggaac aagatgtgaa ggaaaatgag gccttgctgc tccgattcaa gtattacagc
1021 ttttttgatt tgaatccaaa gtatgatgca atcagaatca atcagcttta tgagcaggcc
1081 aaatgggcca ttctcctgga agagattgaa tgcacagaag aagaaatgat gatgtttgca
1141 gccctgcagt atcatatcaa taagctgtca atcatgacat cagagaatca tttgaacaac
1201 agtgacaaag aagttgatga agttgatgct gccctttcag acctggagat tactctggaa
1261 gggggtaaaa cgtcaacaat tttgggtgac attacttcca ttcctgaact tgctgactac
1321 attaaagttt tcaagccaaa aaagctgact ctgaaaggtt acaaacaata ttggtgcacc
1381 ttcaaagaca catccatttc ttgttataag agcaaagaag aatccagtgg cacaccagct
1441 catcagatga acctcagggg atgtgaagtt accccagatg taaacatttc aggccaaaaa
1501 tttaacatta aactcctgat tccagttgca gaaggcatga atgaaatctg gcttcgttgt
1561 gacaatgaaa aacagtatgc acactggatg gcagcctgca gattagcctc caaaggcaag
1621 accatggcgg acagttctta caacttagaa gttcagaata ttctttcctt tctgaagatg
1681 cagcatttaa acccagatcc tcagttaata ccagagcaga tcacgactga tataactcct
1741 gaatgtttgg tgtctccccg ctatctaaaa aagtataaga acaagcagat aacagcgaga
1801 atcttggagg cccatcagaa tgtagctcag atgagtctaa ttgaagccaa gatgagattt
1861 attcaagctt ggcagtcact acctgaattt ggcatcactc acttcattgc aaggttccaa
1921 gggggcaaaa aagaagaact tattggaatt gcatacaaca gactgattcg gatggatgcc
1981 agcactggag atgcaattaa aacatggcgt ttcagcaaca tgaaacagtg gaatgtcaac
2041 tgggaaatca aaatggtcac cgtagagttt gcagatgaag tacgattgtc cttcatttgt
2101 actgaagtag attgcaaagt ggttcatgaa ttcattggtg gctacatatt tctctcaaca
2161 cgtgcaaaag accaaaacga gagtttagat gaagagatgt tctacaaact taccagtggt
2221 tgggtgtgaa tagaaatact gtttaatgaa actccacggc cataacaata tttaacttta
2281 aaagctgttt gttatatgct gcttaataaa gtaagcttga aatttaaaaa aaaaaaaaaa
2341 aaaaaa
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