LOCUS BC017326 1307 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens HMG box domain containing 4, mRNA (cDNA clone
IMAGE:4549441), partial cds.
ACCESSION BC017326
VERSION BC017326.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017326.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: d Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51173870.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000089249"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4549441"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1307
/gene="HMGXB4"
/gene_synonym="HMGBCG"
/gene_synonym="THC211630"
/db_xref="GeneID:10042"
/db_xref="HGNC:HGNC:5003"
/db_xref="MIM:604702"
CDS 454..>1307
/gene="HMGXB4"
/gene_synonym="HMGBCG"
/gene_synonym="THC211630"
/codon_start=1
/product="HMGXB4 protein"
/protein_id="AAH17326.1"
/db_xref="GeneID:10042"
/db_xref="HGNC:HGNC:5003"
/db_xref="MIM:604702"
/translation="MDLLKAITSPLAAGSKPSKKTGEKSSGSSSHSESKKEHHRKKVS
GSSGELPLEDGVSHKSKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVDEESF
QYPSQQATVKKSSKKSARDEQGALLLGHELQSFLKTARKKHKSSSDAHSSPGPEGCGS
DASQFAESHSANLDLSGLEPILVESDSSSGGELEAGELVIDDSYREIKKKKKSKKSKK
KKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTSGPPPSIPYAGAAAPPLPLPGLHTDG
HSEKKKKK"
BASE COUNT 416 a 283 c 336 g 272 t
ORIGIN
1 gatcggcggc gttgaggcgg gatccgggcg agccgagtga agattgtttt gatggtgatc
61 atacctttga ggacatagga cttgcagctg gccgaagcca acgagagaaa aaacgttctt
121 acaaagattt tttaagggaa gaggaagaaa ttgctgctca ggtcaggaat tcttccaaga
181 agaagttgaa ggatagtgaa ctttacttct tggggacgga cacacacaag aagaagagga
241 agcactcctc tgatgattac tactatggag gacagtggtt cttgttctga gtgccgataa
301 accagtgtga aggaggagag aggtggaggg ctggtatttt ggaggattca gcatagaaga
361 acagtctgca tttgtgatac accagatatt tcgtctttgg aatcgtcaca gaagaaaaag
421 aaaaagtcca gcccacagtc tactgataca gctatggacc tgttgaaagc tatcacttcc
481 ccactggcag caggctccaa gccctccaaa aagactgggg agaaatcctc tggctcttca
541 agccattcgg agagtaaaaa ggagcaccac aggaagaaag tcagtggaag cagtggggaa
601 ctacccctag aggatggtgt ctcccacaaa tcgaaaaaaa tgaaacctct ctatgtgaac
661 acagagacac tgacccttcg ggagcctgat ggtttaaaaa tgaaacttat tctgtcacca
721 aaggagaagg gaagcagctc tgttgatgag gagtcttttc aatatccctc ccaacaagcg
781 actgtgaaaa aatcctcaaa gaaatcagct cgggatgagc agggtgcttt actcctagga
841 catgagttac agagctttct gaaaacagcc cggaaaaagc acaagtcatc ctcagacgca
901 cattcatctc ctggccctga aggctgtggg tctgacgcct cccagttcgc agagtcccac
961 agtgctaacc ttgatctttc agggcttgaa cctattctgg tagaatcaga ctcatcctct
1021 ggtggggaac tagaggctgg ggagttagtg atagatgatt cttaccgaga aatcaagaag
1081 aaaaagaagt caaagaagag caaaaagaag aaagacaagg agaagcataa agagaagcga
1141 cactccaagt ccaagagaag tttaggactt tctgccgtgc cagtgggaga ggtcacagtg
1201 acatctggcc ctcctcccag catcccatac gctggagcag cagcacctcc cctgccactt
1261 cctggcctcc acacagatgg gcatagtgaa aaaaaaaaaa aaaaaaa
//