LOCUS BC017300 1718 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 14,
mRNA (cDNA clone IMAGE:5018155), partial cds.
ACCESSION BC017300
VERSION BC017300.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1718)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017300.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: m Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18375653.
FEATURES Location/Qualifiers
source 1..1718
/db_xref="H-InvDB:HIT000089240"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5018155"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1718
/gene="PTPN14"
/gene_synonym="PEZ"
/gene_synonym="PTP36"
/db_xref="GeneID:5784"
/db_xref="MIM:603155"
CDS 225..>1718
/gene="PTPN14"
/gene_synonym="PEZ"
/gene_synonym="PTP36"
/codon_start=1
/product="PTPN14 protein"
/protein_id="AAH17300.1"
/db_xref="GeneID:5784"
/db_xref="MIM:603155"
/translation="MPFGLKLRRTRRYNVLSKNCFVTRIRLLDSNVIECTLSVESTGQ
ECLEAVAQRLELRETHYFGLWFLSKSQQARWVELEKPLKKHLDKFANEPLLFFGVMFY
VPNVSWLQQEATRYQYYLQVKKDVLEGRLRCTLDQVIRLAGLAVQADFGDYNQFDSQD
FLREYVLFPMDLALEEAVLEELTQKVAQEHKAHSGILPAEAELMYINEVERLDGFGQE
IFPVKDNHGNCVHLGIFFMGIFVRNRIGRQAVIYRWNDMGNITHNKSTILVELINKEE
TALFHTDDIENAKYISRLFATRHKFYKQNKICTEQSNSPPPIRRQPTWSRSSLPRQQP
YILPPVHVQCGEHYSETHTSQDSIFHGNEEALYCNSHNSLDLNYLNGTVTNGSVCSVH
SVNSLNCSQSFIQASPVSSNLSIPGSDIMRADYIPSHRHSAIIVPSYRPTPDYETVMR
QMKRGILHTDSQSQSLRNLNIINTHGLHDFFKKKKKKKKKKKKKKKKK"
misc_feature 273..884
/gene="PTPN14"
/gene_synonym="PEZ"
/gene_synonym="PTP36"
/note="B41; Region: Band 4.1 homologues"
/db_xref="CDD:smart00295"
BASE COUNT 485 a 440 c 421 g 372 t
ORIGIN
1 cggctccgcc gccgcgaagg acagcctttc cgcgcgggac tccggggcgc cacgggggcc
61 atgtaagcag ctatcttcca gagggccaca ctgggcatgg acaccctttt ccctgcctgg
121 aggagcacag gtgatagtgt aattttccag tcacgaaact gctaaggcca tctcaggggc
181 gtgtgcgcca ggataggcag gcggcgtccg aggaccacat agccatgcct tttggtctga
241 agctccgccg gacacggcgc tacaacgtcc tgagcaagaa ctgctttgtc acacggattc
301 gcctgctgga cagcaatgtt atcgagtgca cgctgtcggt ggaaagcaca gggcaagaat
361 gcctggaggc tgtggcccag aggctggagc tgcgagagac gcactacttt ggcctttggt
421 ttctcagcaa gagccagcaa gcacgatggg tggagctgga gaaacctctg aagaaacatc
481 tggacaaatt cgctaatgag cctttgcttt tctttggagt catgttctat gtgccaaatg
541 tgtcatggct tcagcaagag gccacaagat atcagtatta cctgcaagtc aaaaaagatg
601 tgcttgaagg gcgattacga tgtacattgg accaggtgat tcggctagcc ggcctagctg
661 tgcaagctga ttttggagac tataatcagt ttgattctca agatttcctc agagagtatg
721 tgctatttcc tatggatttg gccctggaag aggctgttct ggaggagctg acccagaagg
781 tagcccaaga acacaaagcc cacagtggaa tcctgccagc agaagctgaa ctgatgtaca
841 tcaatgaagt tgaacgtttg gatggatttg gacaggaaat cttccctgta aaggacaatc
901 atggaaactg tgtacacctt ggcattttct ttatggggat tttcgtgagg aacagaattg
961 gaagacaagc ggtaatatac aggtggaatg acatggggaa tatcactcat aacaagtcga
1021 ccattctagt ggagctcatc aacaaagaag agactgccct ctttcacacg gatgatatcg
1081 aaaatgccaa gtatatttct cggttgtttg ccacacgaca caagttttac aaacaaaaca
1141 aaatctgcac tgaacagtca aattctccac cccccatcag acgccagccc acctggagcc
1201 ggtcctctct gcccaggcag cagccgtaca tcctgcctcc cgttcacgtc cagtgtggtg
1261 agcactactc ggaaacgcac acctcgcaag acagcatttt tcatgggaat gaagaagcct
1321 tgtattgcaa ctctcacaac agcctggact taaattattt aaatggcact gtcaccaatg
1381 gcagcgtgtg tagcgttcac agcgtcaact ccctcaactg ctcgcaaagt ttcatccagg
1441 cctcccctgt atcctccaac ctcagtatcc ctgggagtga catcatgcgg gccgactaca
1501 tcccgagcca ccggcacagc gcgatcatcg tgccctcgta caggccaacc cccgattatg
1561 agacagtcat gcgccagatg aagaggggga tcctgcatac agacagccag agccagtctc
1621 tgagaaacct caacattatc aacacccatg gcctccatga ctttttcaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//