LOCUS BC017285 1112 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens coatomer protein complex, subunit epsilon, mRNA (cDNA clone MGC:29652 IMAGE:4891380), complete cds. ACCESSION BC017285 VERSION BC017285.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1112) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1112) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC017285.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1112 /db_xref="H-InvDB:HIT000037920" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29652 IMAGE:4891380" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1112 /gene="COPE" /gene_synonym="epsilon-COP" /gene_synonym="FLJ13241" /db_xref="GeneID:11316" /db_xref="HGNC:HGNC:2234" /db_xref="MIM:606942" CDS 6..932 /gene="COPE" /gene_synonym="epsilon-COP" /gene_synonym="FLJ13241" /codon_start=1 /product="coatomer protein complex, subunit epsilon" /protein_id="AAH17285.1" /db_xref="GeneID:11316" /db_xref="HGNC:HGNC:2234" /db_xref="MIM:606942" /translation="MAPPAPGPASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLS SPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVA ELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLD RLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLL LNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQ LKDAHRSHPFIKEYQAKENDFDRLVLQYAPSA" BASE COUNT 258 a 358 c 329 g 167 t ORIGIN 1 gcgaaatggc gcctccggcc cccggcccgg cctccggcgg ctccggggag gtagacgagc 61 tgttcgacgt aaagaacgcc ttctacatcg gcagctacca gcagtgcata aacgaggcgc 121 agcgggtgaa gctgtcaagc ccagagagag acgtggagag ggacgtcttc ctgtatagag 181 cgtacctggc gcagaggaag ttcggtgtgg tcctggatga gatcaagccc tcctcggccc 241 ctgagctcca ggccgtgcgc atgtttgctg actacctcgc ccacgagagt cggagggaca 301 gcatcgtggc cgagctggac cgagagatga gcaggagcgt ggacgtgacc aacaccacct 361 tcctgctcat ggccgcctcc atctatctcc acgaccagaa cccggatgcc gccctgcgtg 421 cgctgcacca gggggacagc ctggagtgca cagccatgac agtgcagatc ctgctgaagc 481 tggaccgcct ggacctcgcc cggaaggagc tgaagagaat gcaggacctg gacgaggatg 541 ccaccctcac ccagctcgcc actgcctggg tcagcctggc cacgggtggt gagaagctgc 601 aggatgccta ctacatcttc caggagatgg ctgacaagtg ctcgcccacc ctgctgctgc 661 tcaatgggca ggcggcctgc cacatggccc agggccgctg ggaggccgct gagggcctgc 721 tgcaggaggc gctagacaag gatagtggct acccggagac gctggtcaac ctcatcgtcc 781 tgtcccagca cctgggcaag ccccctgagg tgacaaaccg atacctgtcc cagctgaagg 841 atgcccacag gtcccatccc ttcatcaagg agtaccaggc caaggagaac gactttgaca 901 ggctggtgct acagtacgct cccagcgcct gaggctggcc cagagctgtc aggaccatga 961 agccaggaca gaggccagga gccagccctg cagccctccc cacccggcat ccacctgcat 1021 cccctctggg ggcaggagcc cacccccagc acccccatct gttaataaat atctcaactc 1081 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //