LOCUS BC017285 1112 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coatomer protein complex, subunit epsilon, mRNA (cDNA
clone MGC:29652 IMAGE:4891380), complete cds.
ACCESSION BC017285
VERSION BC017285.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1112)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1112)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC017285.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: i Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1112
/db_xref="H-InvDB:HIT000037920"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29652 IMAGE:4891380"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1112
/gene="COPE"
/gene_synonym="epsilon-COP"
/gene_synonym="FLJ13241"
/db_xref="GeneID:11316"
/db_xref="HGNC:HGNC:2234"
/db_xref="MIM:606942"
CDS 6..932
/gene="COPE"
/gene_synonym="epsilon-COP"
/gene_synonym="FLJ13241"
/codon_start=1
/product="coatomer protein complex, subunit epsilon"
/protein_id="AAH17285.1"
/db_xref="GeneID:11316"
/db_xref="HGNC:HGNC:2234"
/db_xref="MIM:606942"
/translation="MAPPAPGPASGGSGEVDELFDVKNAFYIGSYQQCINEAQRVKLS
SPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVA
ELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLECTAMTVQILLKLD
RLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLL
LNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQ
LKDAHRSHPFIKEYQAKENDFDRLVLQYAPSA"
BASE COUNT 258 a 358 c 329 g 167 t
ORIGIN
1 gcgaaatggc gcctccggcc cccggcccgg cctccggcgg ctccggggag gtagacgagc
61 tgttcgacgt aaagaacgcc ttctacatcg gcagctacca gcagtgcata aacgaggcgc
121 agcgggtgaa gctgtcaagc ccagagagag acgtggagag ggacgtcttc ctgtatagag
181 cgtacctggc gcagaggaag ttcggtgtgg tcctggatga gatcaagccc tcctcggccc
241 ctgagctcca ggccgtgcgc atgtttgctg actacctcgc ccacgagagt cggagggaca
301 gcatcgtggc cgagctggac cgagagatga gcaggagcgt ggacgtgacc aacaccacct
361 tcctgctcat ggccgcctcc atctatctcc acgaccagaa cccggatgcc gccctgcgtg
421 cgctgcacca gggggacagc ctggagtgca cagccatgac agtgcagatc ctgctgaagc
481 tggaccgcct ggacctcgcc cggaaggagc tgaagagaat gcaggacctg gacgaggatg
541 ccaccctcac ccagctcgcc actgcctggg tcagcctggc cacgggtggt gagaagctgc
601 aggatgccta ctacatcttc caggagatgg ctgacaagtg ctcgcccacc ctgctgctgc
661 tcaatgggca ggcggcctgc cacatggccc agggccgctg ggaggccgct gagggcctgc
721 tgcaggaggc gctagacaag gatagtggct acccggagac gctggtcaac ctcatcgtcc
781 tgtcccagca cctgggcaag ccccctgagg tgacaaaccg atacctgtcc cagctgaagg
841 atgcccacag gtcccatccc ttcatcaagg agtaccaggc caaggagaac gactttgaca
901 ggctggtgct acagtacgct cccagcgcct gaggctggcc cagagctgtc aggaccatga
961 agccaggaca gaggccagga gccagccctg cagccctccc cacccggcat ccacctgcat
1021 cccctctggg ggcaggagcc cacccccagc acccccatct gttaataaat atctcaactc
1081 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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