LOCUS BC017281 1439 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens YdjC homolog (bacterial), mRNA (cDNA clone
IMAGE:4876099), with apparent retained intron.
ACCESSION BC017281
VERSION BC017281.2
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1439)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1439)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017281.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63054869
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1439
/db_xref="H-InvDB:HIT000089234"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4876099"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 250 a 474 c 469 g 246 t
ORIGIN
1 ggtggaccca ggcggccatg tcccgccctc gcatgcgcct ggtggtcacc gcggacgact
61 ttggttactg cccgcgacgc gatgagggta tcgtggaggc ctttctggcc ggggccgtga
121 ccagcgtgtc cctgctggtc aacggtgcgg ccacggagag cgcggcggag ctggcccgca
181 ggtgagggga gggcctctag cagggcggcg atcggcttgg ggcgcgcggc tccgcggccg
241 ctagtgctcc agctcgcgct ccgccctcag gcacagcatc cccacgggcc tccacgccaa
301 cctgtccgag ggccgccccg tgggtccggc ccgccgtggc gcctcatcgc tgctcggccc
361 ggaaggcttc ttccttggca agatgggatt ccgggaggcg gtggcggccg gagacgtgga
421 tttgcctcag gtgcggagcc gcagctacag gaggatgctc gcgaggaccc ccagagctcc
481 gcccggaggg tactgtgagg ccgttaggag ctggcggtgg atgacttccg cattcaaaca
541 ctggagccat cacacggaag cacgaggagg gtatcctcgg cagctactcc cggtcgctca
601 aggtgtctct cgctcgccct ctaggtgcgg gaggagctcg aggcccaact aagctgcttc
661 cgggagctgc tgggcagggc ccccacgcac gcggacgggc accagcacgt gcacgtgctc
721 ccaggtggac agacgccttc gtgggcctga gcacttgcgg ccggcacatg tccgctcacc
781 gcgtgtccgg ggccctggcg cgggtcctgg aaggtaccct agcgggccac accctgacag
841 ccgagctgat ggcgcacccc ggctacccca gtgtgcctcc caccggcggc tgcggtgaag
901 gccccgacac tttctcttgc tcttgggagc ggctgcatga gctgcgcgtc ctcaccgcgc
961 ccacgctgcg ggcccagctt gcccaggatg gcgtgcagct ttgcgccctc gacgacctgg
1021 actccaagag gccaggggag gaggtcccct gtgagcccac tctggaaccc ttcctggaac
1081 cctccctact ctgaccccct acagacaacc aagcactaat ccccttagta ccaagaaagg
1141 ggagccagga tttagtcctg gcccagccca gagctgggac ctggagcacg atctgttgac
1201 ttccctgggt aggacactgc cacctctggg ctcaggtcct catgcctcca aatggcatct
1261 agagtttgag cagccttctt ggctgcaggc aggcctagcc tgtggcagcg ggctagggcc
1321 cgcagagcat ttggtgcccc tccatgttgc aatgcaaaca ccttcaccac tggggcagtg
1381 gggagagatg gctatattaa taaaataacg tgtgtcttta aaaaaaaaaa aaaaaaaaa
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