LOCUS BC017269 1669 bp mRNA linear HUM 11-DEC-2003 DEFINITION Homo sapiens chromosome 10 open reading frame 47, mRNA (cDNA clone MGC:29779 IMAGE:4588686), complete cds. ACCESSION BC017269 VERSION BC017269.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1669) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1669) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC017269.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: e Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..1669 /db_xref="H-InvDB:HIT000050678" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29779 IMAGE:4588686" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1669 /gene="C10orf47" /gene_synonym="MGC35403" /db_xref="GeneID:254427" CDS 155..1180 /gene="C10orf47" /gene_synonym="MGC35403" /codon_start=1 /product="C10orf47 protein" /protein_id="AAH17269.1" /db_xref="GeneID:254427" /translation="MPVTHRKSDASDMNSDTSPSCRLRAFSRGGSLESRSSSSRSRSF TLDDESLKYLTHEEKDVLLFFEETIDSLDEDFEEPVLCDGGVCCLCSPSLEESTSSPS EPEDVIDLVQPAPGAGEAEGLPEGTQAAGPAPAGKEHRKQDAETPPPPDPPAPETLLA PPPLPSTPDPPRRELRAPSPPVEHPRLLRSVPTPLVMAQKISERMAGNEALSPTSPFR EGRPGEWRTPAARGPRSGDPGPGPSHPALANGFPSAHEALKSAPSSFAPAGKSLCFRP GPALPSTRARQSFPGPRQPNGAQDWRRADSLPRPQGITVQFVGRGSSEEARREALRKL GLLRESS" BASE COUNT 331 a 540 c 506 g 292 t ORIGIN 1 gggcggcggc gtgagggctc cgggtcgctg gcggcgtgga cacctgagtc ccggggtagg 61 ggtctcccgc gaggagtgag ctgttgccgc agaatgggct gctggctcct gccctgcttc 121 ctgtgatcga gccggccctg aggactctgt ggagatgcct gtaacccacc ggaaatcaga 181 cgcatctgac atgaactcag acacgtcccc cagctgcagg ctccgagcct tcagcagagg 241 cggcagcctg gagagtcgaa gcagcagctc tcgctccaga agcttcactt tggatgatga 301 gagcctgaag tacctcaccc atgaggaaaa ggatgtgctc ctgttttttg aagagacgat 361 tgactcccta gacgaggact ttgaggagcc agtgctgtgc gatggaggag tgtgctgcct 421 ctgctccccg tctctggagg agagcacctc cagtccctcc gagcctgaag atgtcatcga 481 cttagtgcag ccagcacctg gcgccgggga agccgagggc cttccagagg ggacccaggc 541 agcagggcct gcacctgctg ggaaggagca caggaaacaa gatgctgaga ctcctccacc 601 tccagacccc ccggctcccg agacccttct tgcgccacca cccctgccta gcacccccga 661 tccccccagg agggagctgc gcgccccctc cccgccggtg gagcacccca gactcctgcg 721 ctctgttccc acgcccctcg ttatggcgca gaagatttcc gagaggatgg cggggaacga 781 agccctctcg cccacctccc cgttcaggga gggccggccc ggggagtgga ggacacctgc 841 cgcccggggg ccccgcagtg gagaccctgg cccggggccc agccacccgg cgctggccaa 901 cggcttccca agtgcgcatg aggccctgaa gagcgcaccc agctccttcg cgcccgctgg 961 gaagtccctc tgcttccgcc ctggcccggc cctgcccagc acgcgggccc gtcagagctt 1021 ccccgggccc cggcagccca acggcgccca ggactggcgc cgcgcagact ccctgccccg 1081 gccccagggc atcaccgtgc agttcgtggg ccgcggctcc tcggaggagg cgcgcaggga 1141 ggccctgcgg aagctggggc tgctcaggga gagttcgtga gggccgcgcg ggctccagtc 1201 caccctgttt ctccccaccc tgaagagagg gtgaaagagt cgctgcaccc aggagctgtt 1261 tggtctaaaa tggaagtgac agcgggagcc cctgccctct gtggcacatc ggagtctaga 1321 ggtgcctggc tggggcctcc tggctgagca cgcaccgcaa gctccagcca ccggcacaga 1381 gaactcttcc ctaaaggaat ctggccgagg gcttgtctcc cttttcccaa gaactgagag 1441 agagagaata acctgttaga cccataggtt tccgtgatgt gtaaatgcca tcttttgggg 1501 gttgggagga gtaggactgg tctgattatc attcttgagt ctcatctacc ctcttctcga 1561 agtacatgac atgaaagttc agatcccttc cactcaggat tctcgccgcc ttttctaaga 1621 aaataataaa aaaaaatgct tgtttcaaaa aaaaaaaaaa aaaaaaaaa //