LOCUS BC017254 2693 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SH3-binding domain protein 5-like, mRNA (cDNA clone
MGC:29679 IMAGE:3051344), complete cds.
ACCESSION BC017254
VERSION BC017254.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2693)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2693)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC017254.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: a Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308302.
FEATURES Location/Qualifiers
source 1..2693
/db_xref="H-InvDB:HIT000037906"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29679 IMAGE:3051344"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2693
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/db_xref="GeneID:80851"
/db_xref="HGNC:HGNC:29360"
CDS 42..1223
/gene="SH3BP5L"
/gene_synonym="KIAA1720"
/codon_start=1
/product="SH3-binding domain protein 5-like"
/protein_id="AAH17254.1"
/db_xref="GeneID:80851"
/db_xref="HGNC:HGNC:29360"
/translation="MAELRQVPGGRETPQGELRPEVVEDEVPRSPVAEEPGGGGSSSS
EAKLSPREEEELDPRIQEELEHLNQASEEINQVELQLDEARTTYRRILQESARKLNTQ
GSHLGSCIEKARPYYEARRLAKEAQQETQKAALRYERAVSMHNAAREMVFVAEQGVMA
DKNRLDPTWQEMLNHATCKVNEAEEERLRGEREHQRVTRLCQQAEARVQALQKTLRRA
IGKSRPYFELKAQFSQILEEHKAKVTELEQQVAQAKTRYSVALRNLEQISEQIHARRR
GGLPPHPLGPRRSSPVGAEAGPEDMEDGDSGIEGAEGAGLEEGSSLGPGPAPDTDTLS
LLSLRTVASDLQKCDSVEHLRGLSDHVSLDGQELGTRSGGRRGSDGGARGGRHQRSVS
L"
BASE COUNT 540 a 774 c 850 g 529 t
ORIGIN
1 gtcctctctt gtgcataggg ctctgccctc cccctgtcag catggctgag ctcagacagg
61 ttccaggagg gcgggagacc ccacaggggg agctgcggcc tgaagttgta gaggatgaag
121 tccctaggag cccagtcgca gaagagcctg gaggaggtgg aagcagcagc agtgaggcca
181 aattgtcccc aagagaggag gaagaactgg atcctagaat acaggaggag ttggagcacc
241 tgaaccaggc cagcgaggag atcaaccagg tggaactaca gctggatgag gccaggacca
301 cctatcggag gatcctacag gagtcggcga ggaaactgaa tacacagggt tcccacttgg
361 ggagctgcat cgagaaagcc cggccctact atgaggctcg gcggctggct aaggaggctc
421 agcaggagac acagaaggca gcgctgcggt acgagcgggc cgtaagcatg cacaacgctg
481 ctcgagaaat ggtgtttgtg gctgagcagg gcgtcatggc tgacaagaac cgactggacc
541 ccacgtggca ggagatgctg aaccatgcta cctgcaaggt gaatgaggcg gaggaagagc
601 ggcttcgagg tgagcgggag caccagcgag tgactcggct gtgccaacag gctgaggctc
661 gggtccaagc cctgcagaag accctccgga gggccatcgg caagagccgc ccctactttg
721 agctcaaggc ccagttcagc cagatcctgg aggagcacaa ggccaaggtg acagaactgg
781 agcagcaggt agctcaggcc aagacgcgct actccgtggc ccttcgtaac ctggagcaga
841 tcagcgagca gattcacgca cggcgccgcg ggggtctgcc tccccacccc ctgggccctc
901 ggcgctcctc ccccgtgggg gccgaggcag gacccgagga catggaggac ggagacagcg
961 ggattgaggg ggccgagggt gcggggctgg aggagggcag cagcctgggg cccggccccg
1021 cccccgacac cgataccctg agtctgctga gcctgcgcac ggtggcttca gacctgcaga
1081 agtgcgactc cgtggagcac ttgcgaggcc tctcggacca cgtcagtctg gacggccaag
1141 agctgggaac gcggagtgga gggcgccggg gcagcgacgg cggagcccgt gggggtcggc
1201 accagcgcag cgtcagcctg tagccgaggg gccagggttc ctggcttgaa tctgccacca
1261 cgggccggtt ggggcccaca gtcttctcac gccctctcct ctggggcctc gtcttcccga
1321 aggtcccctt ctccagtgct tccctgggag aggccagctg tgttcgagtc ctctgtgcct
1381 gccctggcgt tcttacagcc tcccccttcc cctcagcagg cggctctctt tgccttaccc
1441 attcagaagg ctcgccctcg gcgctctgtc tgcctctgcc tgccagctca tcacgatctg
1501 cagggcattg accctttgct ttccctttct gctccctctc tttccatctg tttggctttt
1561 tccctcaggg aacttggtct agaaggcact gggaagctca tcagagaaaa tgggtgctgg
1621 gcctgagtac tcccgtcgga ggggatggac agtcacccct cccgttggtt tccagccccg
1681 ccccccttcc caaggcaact ctggagggta ccctaggtat gctgctgagc cctgcccccc
1741 gtcctgctcc agcctgcccg tgtgtaacct gtaagatgta ctgtgtgcct ccggaagaca
1801 ccacctttcc cttcagcatt ccctttcatg acctgaggca ctctgcgatg tgtgccccaa
1861 agcagaactt acagggcctg caggaagctg gtgtcaggga gagaaaccca accccactgt
1921 caacataggg agcatcacca actccagact ggctcctgtg ggtatggtgt ttccgctggg
1981 ctgggtcctc aacattgcca aggtgctagt gggtccctaa gagggcccat gttgggggtg
2041 aagtcatgag gtcctgaagg cttaggcccc tgtcattccc accctcactc ttgctgcaca
2101 gttgtgttta ctttttctgg gtagaggatg ctgaactgac tcagcaccct cctgcaggac
2161 ggggttaggg aatttggtgc tcaattgctc tcccttgctc ttccccaaac tgaaaatacc
2221 tactgcagga tccctcgggg cacactgaag cttggctgcc aaccctctta cttcctttgt
2281 tacagggagg ggttggcttg gggtgaaaag ttctgccctc cgcagggagc agctccagct
2341 gcctggcagt gctcccagtt tgtagggaag ccacaccaga tctgggtgcc ttgggagaac
2401 cagtccttcc ttttgaccca ccccaggaag atggagtgct cttttctagg cccatgttct
2461 gccagcaacc gggatgcgtg ggcaactgga ctctgcacgg gggtctacag gttgagggag
2521 gttggtcaca atgagaacct cggggtttga ggtggccatg ggcagacagc cgaaagggag
2581 ggagggtgtg ggtgtgcgtg tgtgcatgtg ctggtgtgta agggggaaag ggtctttcct
2641 ggttttattt aaataaagta gtttatgtaa cagtaaaaaa aaaaaaaaaa aaa
//