LOCUS BC017224 1722 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens translocase of outer mitochondrial membrane 40 homolog
(yeast), mRNA (cDNA clone MGC:14351 IMAGE:4298914), complete cds.
ACCESSION BC017224
VERSION BC017224.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1722)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017224.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: k Column: 24.
FEATURES Location/Qualifiers
source 1..1722
/db_xref="H-InvDB:HIT000037888"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14351 IMAGE:4298914"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1722
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
CDS 100..1185
/gene="TOMM40"
/gene_synonym="C19orf1"
/gene_synonym="D19S1177E"
/gene_synonym="PER-EC1"
/gene_synonym="PEREC1"
/gene_synonym="TOM40"
/codon_start=1
/product="TOMM40 protein"
/protein_id="AAH17224.1"
/db_xref="GeneID:10452"
/db_xref="MIM:608061"
/translation="MGNVLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGGSL
GAGTSTSRSSERTPGAATASASGAAEDGACGCLPNPGTFEECHRKCKELFPIQMEGVK
LTVNKGLSNHFQVNHTVALSTIGESNYHFGVTYVGTKQLSPTEAFPVLVGDMDNSGSL
NAQVIHQLGPGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILV
AHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYH
KASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFKGSVDSNWIVGATLEKKLPP
LPLTLALGAFLNHRKNKFQCGFGLTIG"
BASE COUNT 367 a 545 c 522 g 288 t
ORIGIN
1 gagaaccggg gccggagccg ggtgcggatt tgctggggct gagtcggggg cgcgcgggcc
61 ctgacctctg ccctctgacc tctcccctag caggcgacca tggggaacgt gttggctgcc
121 agctcgccgc ccgcagggcc gccaccgccg cctgcgccgg ccctcgtggg gctgccgcca
181 cctccgccct cgccgccggg cttcacgctg ccgccgctgg gaggcagcct gggcgccggc
241 accagtacga gtcgaagttc ggaacggacc cccggggctg caaccgccag cgcctcaggg
301 gccgccgagg atggggcctg cggctgcctg cccaacccgg gcacattcga ggagtgccac
361 cggaagtgca aggagctgtt tcccattcag atggagggtg tcaagctcac agtcaacaaa
421 gggttgagta accattttca ggtcaaccac acagtagccc tcagcacaat cggggagtcc
481 aactaccact tcggggtcac atatgtgggg acaaagcagc tgagtcccac agaggcgttc
541 cctgtactgg tgggtgacat ggacaacagt ggcagtctca acgctcaggt cattcaccag
601 ctgggccccg gtctcaggtc caagatggcc atccagaccc agcagtcgaa gtttgtgaac
661 tggcaggtgg acggggagta tcggggttct gacttcacag cagccgtcac cctggggaac
721 ccagacgtcc tcgtgggttc aggaatcctc gtagcccact acctccagag catcacgcct
781 tgcctggccc tgggtggaga gctggtctac caccggcggc ctggagagga gggcactgtc
841 atgtctctag ctgggaaata cacattgaac aactggttgg caacggtaac gttgggccag
901 gcgggcatgc acgcaacata ctaccacaaa gccagtgacc agctgcaggt gggtgtggag
961 tttgaggcca gcacaaggat gcaggacacc agcgtctcct tcgggtacca gctggacctg
1021 cccaaggcca acctcctctt caaaggctct gtggatagca actggatcgt gggtgccacg
1081 ctggagaaga agctcccacc cctgcccctg acactggccc ttggggcctt cctgaatcac
1141 cgcaagaaca agtttcagtg tggctttggc ctcaccatcg gctgagccct cctggccccc
1201 gccttccacg cccttccgat tccacctcca cctccacctc cccctgccac agaggggaga
1261 cctgagcccc cctcccttcc ctcccccctt gggggtcggg ggggacattg gaaaggaggg
1321 accccgccac cccagcagct gaggagggga ttctggaact gaatggcgct tcgggattct
1381 gagtagcagg ggcagcatgc ccagtgggcc tggggtcccg ggagggattc cggaattgag
1441 gggcacgcag gattctgagc accaggggca gaggcggcca gacaacctca gggaggagtg
1501 tcctggcgtc cccatcctcc aaagggcctg ggcccgcccc gagggggcag cgagaggagc
1561 ttccccatcc ccggtcagtc caccctgccc cgtccacttt cccatctcct cggtataaat
1621 catgtttata agttatggaa gaaccgggac attttacaga aaaaaaacaa aaaacaacaa
1681 aaaatatacg tgggaaaaaa aacgaaaaaa aaaaaaaaaa aa
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