LOCUS BC017210 2682 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coproporphyrinogen oxidase, mRNA (cDNA clone MGC:10533
IMAGE:3956896), complete cds.
ACCESSION BC017210
VERSION BC017210.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2682)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017210.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41393598.
FEATURES Location/Qualifiers
source 1..2682
/db_xref="H-InvDB:HIT000037878"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10533 IMAGE:3956896"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2682
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
CDS 59..1423
/gene="CPOX"
/gene_synonym="CPX"
/gene_synonym="HCP"
/codon_start=1
/product="coproporphyrinogen oxidase"
/protein_id="AAH17210.1"
/db_xref="GeneID:1371"
/db_xref="HGNC:HGNC:2321"
/db_xref="MIM:121300"
/translation="MALQLGRLSSGPCWLVARGGCGGPRAWSQCGGGGLRAWSQRSAA
GRVCRPPGPAGTEQSRGLGHGSTSRGGPWVGTGLAAALAGLVGLATAAFGHVQRAEML
PKTSGTRATSLGRPEEEEDELAHRCSSFMAPPVTDLGELRRRPGDMKTKMELLILETQ
AQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEA
AKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGHKQWW
FGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGI
GGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRY
VEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEILEVLRHPR
DWVR"
BASE COUNT 681 a 533 c 698 g 770 t
ORIGIN
1 ggggctcaaa cgcagggctc tgggacgcag gcactgctcc aggtgatagt gcgggaacat
61 ggccttgcag ctgggcaggc tgagctcggg cccctgctgg ctcgtggcgc ggggcggctg
121 cggagggccc cgcgcctggt cccagtgcgg cggcggaggg ctccgagcct ggtcccagcg
181 cagcgcagcc ggacgcgtct gccggccccc tggcccggct ggcacggagc agagccgcgg
241 gctggggcac ggctcgacgt cgagaggcgg cccctgggtg gggacagggc tggccgcggc
301 gctggcgggg ttggtggggc tggccaccgc cgccttcggg catgtgcagc gggcggagat
361 gttgcctaag acctcgggga cgcgggccac ttcgctgggg aggccggagg aggaggagga
421 tgagctggcc caccgctgca gcagcttcat ggccccgcct gtgaccgacc tgggcgagct
481 gcgaaggagg ccgggcgaca tgaagaccaa gatggagctg ctgattctgg agacccaggc
541 ccaggtgtgc caggctctgg cacaggtaga cgggggcgcc aacttttctg tggaccggtg
601 ggagaggaag gaaggaggtg gcggcatcag ctgtgtactt caagatgggt gtgttttcga
661 aaaggctggg gtgagcattt ctgttgttca tggaaatctt tcagaggaag ctgcaaaaca
721 aatgagaagc agaggaaaag ttctgaagac taaagatggt aaattgccat tttgtgctat
781 gggcgtgagc tctgttatcc accccaagaa tcctcatgct cctactatcc atttcaacta
841 cagatacttt gaagtagaag aagctgatgg ccacaagcag tggtggtttg gtggtggatg
901 tgacctcact ccaacatact tgaatcaaga agacgctgtc cattttcaca gaactctgaa
961 ggaggcttgt gaccagcatg gtccagatct ctaccccaaa tttaaaaaat ggtgtgatga
1021 ttacttcttt atagcccatc gtggagagcg gcggggcatt ggtggtatct tttttgatga
1081 tcttgactct ccgtccaagg aggaggtgtt tcgctttgta cagagctgtg ccagggctgt
1141 agttccttct tacattcccc ttgtgaaaaa gcactgtgat gactcattca ccccccagga
1201 gaagctgtgg cagcagctca gaagaggacg gtatgtagaa tttaatctgc tgtatgatcg
1261 gggcacaaag tttggcctct tcactccagg atccagaatt gaaagtatct tgatgtcttt
1321 acctctaact gcccgatggg agtacatgca ttcaccctca gagaattcca aagaagctga
1381 aattctggaa gttctacgcc atccaaggga ctgggtgcgt tgatgcaggc agaatggctg
1441 tgcaggggtt tggagggcac acgatgtgtg ctccccatgc cactggtcgg cactttgcca
1501 ctgtgtggca gttacccgtg ccttagtctt ctccactctg caccctacct cgtgggcaga
1561 tgataacatg ttttggatgc tgtcagtgat gaatggtgag atggcagatt gtcagagtca
1621 attgattaaa cctcatttat acttctagtg tcattttata tgactagttt acaaaatagg
1681 acattgagtt tccaagtatt gagataaggg aatataaata gtattatatg tatcaggaaa
1741 tctctcatct tgtttttgtt tcatgtattt tttaaagttt tcatttgtgc cacaaaaatc
1801 tgtcgtggaa tatattttat tttcattaat tcagtgaagt tgagacttca tagtaatttt
1861 agaatgcaac ttgaaggtaa aaattttact ttgtcaatac tgaagtctct gctgtaatcc
1921 ttatatatct ttctccagag aacataatat tgtcaaatag atacacattt ttctaatagg
1981 tatttagaag cacttgaaat attcttaatc tctgcatgtg ttacaattca gttatttctg
2041 tagtttgtaa actctaaagt gacattacta ttattttaga gatgtctaag ttgtaatttt
2101 gatttttgtg gaaccattgt ttgttaatgt tgggattctc tgcacttttg aatgtgaaag
2161 cttatatccc tgaattctga tacttaagag ttttctattt cagacatctc tgtgtggaag
2221 ttgagactaa gaataatcct agggatgtca tgaatttagg caatgtttct catttggaaa
2281 atgaaatgag aaataatttc cttctttaaa gcaagtatat atagtatgag aaacttggag
2341 gcatttcata cacacgtttc ttaggaaaat ggacacattg aaaatgtcct ctttttttat
2401 attagagatt ctgcagctct ttgctcttaa gagcaaatca caacaggatt cttaatgtat
2461 gatttctttg ttcatatatt atgaatgtat tattttattt gcttcgtaat aaagtttata
2521 aggaagagca tctcatacat atcattatcg tggaacacgt tgaatgtttg tgattctgtg
2581 tggccttttt ggggctggaa aatgtatgaa ttcttcaact gtcttacaag agatctgcta
2641 ataaatttta ttattaaata agaaaaaaaa aaaaaaaaaa aa
//