LOCUS BC017204 2498 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens SHQ1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:3423 IMAGE:3617948), complete cds. ACCESSION BC017204 VERSION BC017204.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2498) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2498) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC017204.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 12 Row: d Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 56550032. FEATURES Location/Qualifiers source 1..2498 /db_xref="H-InvDB:HIT000050674" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3423 IMAGE:3617948" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2498 /gene="SHQ1" /gene_synonym="FLJ10539" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" CDS 98..1831 /gene="SHQ1" /gene_synonym="FLJ10539" /codon_start=1 /product="SHQ1 homolog (S. cerevisiae)" /protein_id="AAH17204.1" /db_xref="GeneID:55164" /db_xref="HGNC:HGNC:25543" /translation="MLTPAFDLSQDPDFLTIAIRVPYARVSEFDVYFEGSDFKFYAKP YFLRLTLPGRIVENGSEQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRT AKPLVEEIGASEIPEEVVDDEEFDWEIEQTPCEEVSESALNPQCHYGFGNLRSGVLQR LQDELSDVIDIKDPDFTPAAERRQKRLAAELAKFDPDHYLADFFEDEAIEQILKYNPW WTDKYSKMMAFLEKSQEQENHATLVSFSEEEKYQLRKFVNKSYLLDKRACRQVCYSLI DILLAYCYETRVTEGEKNVESAWNIRKLSPTLCWFETWTNVHDIMVSFGRRVLCYPLY RHFKLVMKAYRDTIKILQLGKSAVLKCLLDIHKIFQENDPAYILNDLYISDYCVWIQK VKSKKLAALAEALKEVSLTKAQLGLELEELEAAALLVQEEETALKAAHSVSGQQTLCS SSEASDSEDSDSSVSSGNEDSGSDSEQDELKDSPSETVSSLQGPFLEESSAFLIVDGG VRRNTAIQESDASQGKPLASSWPLGVSGPLIEELGEQLKTTVQVSEPKGTTAVNRSNI QERDGCQTPNN" BASE COUNT 726 a 503 c 589 g 680 t ORIGIN 1 ccgagagttc ctgcgcgtgg ggagttggag agtttgcgtg gcgggaacgc ggcggcagtg 61 agagcgagcg gcgccggccc ttgcgtccgg tgcggcgatg ctgaccccgg cgttcgacct 121 cagccaggat ccggacttcc tgactatcgc catccgcgtg ccctacgccc gggtctccga 181 gttcgacgtc tacttcgagg ggtctgactt caagttctac gccaagccat actttctcag 241 attaaccctt cctggaagaa ttgtagaaaa tggaagtgag caagggtcct atgatgcaga 301 taaaggaatt tttaccattc gcctgcccaa agaaacccct ggccagcatt ttgaggggct 361 gaacatgtta actgctcttc tggcaccaag aaaatccagg acagcaaaac cacttgtgga 421 agaaataggt gcttctgaga ttcctgagga agtagttgac gatgaagagt ttgattggga 481 aattgagcag acaccctgtg aagaggtatc agaaagtgct ttgaatccgc agtgccacta 541 tggatttgga aacttacgat caggagtgtt gcaacggtta caggatgaac tgagtgatgt 601 tattgatatt aaggatccag atttcacccc tgcagctgaa cgaagacaga agcgcctggc 661 cgctgagctg gccaagtttg atcctgatca ttatctagct gacttttttg aagatgaggc 721 gattgaacag attttgaagt ataatccttg gtggactgac aaatattcaa aaatgatggc 781 ctttttggaa aagagtcagg aacaagaaaa tcatgctaca ttagtgtctt tttctgaaga 841 agagaagtat cagctacgaa aatttgtcaa taaatcttat ctgctggaca agagagcctg 901 tcgtcaagtg tgctacagtt tgattgatat ccttctggca tattgctatg aaacccgtgt 961 cactgaagga gagaagaatg ttgaatctgc atggaatatc aggaaactga gtccaacact 1021 atgctggttt gagacttgga ctaacgttca tgatatcatg gtgtcttttg gaagaagggt 1081 gttgtgttac ccactctatc gccatttcaa gctggtgatg aaggcctaca gggacactat 1141 aaagatattg caactgggta aaagtgcagt tttaaagtgt ctcctggata ttcacaaaat 1201 ttttcaggaa aatgacccag cgtacatact gaatgatctc tacatctcag actactgtgt 1261 gtggattcag aaagtcaaat ccaaaaagtt ggcagctctt gcagaagcct taaaggaagt 1321 ctcccttaca aaggcccagc tggggttaga actggaagaa ctagaagcag cagcactgct 1381 tgtccaggag gaagaaactg cattaaaagc agcccattca gtttctgggc agcagacact 1441 ttgctccagc tctgaggcaa gtgattcgga ggactcagac agcagcgtgt catctggaaa 1501 cgaagactca ggctcagatt cagaacaaga tgaactcaaa gatagtccat ctgagacagt 1561 cagttctttg caaggtccct ttcttgaaga aagcagtgcc tttcttattg ttgatggtgg 1621 agtacgcaga aacacagcca tccaggagtc tgatgccagt cagggaaagc cacttgcctc 1681 ttcctggcct cttggagtgt ctgggcctct gatagaggag cttggggaac aactgaagac 1741 tacagttcag gtttctgaac ccaagggcac cactgctgta aaccgcagca atattcagga 1801 gagagacggc tgtcagacac caaataattg actcttaggt ggttttattc attgttgaga 1861 aatatggtag attgggtttc atttaccgaa tgagaattct tcattttcac tttgtaattt 1921 ttcttagtat atagtcagcc cactgtattt gtgtgttcca catctgtgga ttcaaccaac 1981 tgcagatcaa aaatattgaa gaaaaaatcg catctgtacc aaacatgtac agactttttt 2041 cttgttatta ttctctaaat aatacagtat gacaactatt tccacagcat ttacattgta 2101 ttgggtaata taagtaatct agtgatgatt taaactgtgc aggaggatgt gggtaggtta 2161 tatgcaaata ctgcaccatt ttttatcagg ggcttgagca tctgaggatt ttagtatcct 2221 caggagtcct ggaaccaacc ccccacagat acggggacaa ctttatgaca ttgtttttca 2281 accaatgaat gtttatacct tttgttttcc ttgccgcgac tgtgaagata aagttcaaaa 2341 gtatttttac caaagtgtag ctaatatttc aagctgaaaa taatagttct actgcccgtg 2401 tctccagaat gtagagccca tcaatatttt tattttagga ggtgtacttg acacccaata 2461 aactgcacgt atcaaaagtg aaaaaaaaaa aaaaaaaa //